RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA870096", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA870096 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28357985 28357985 PRJNA870096_S_NODE_86026_length_189_cov_2.452055_g84362_i0 PRJNA870096 86026 189 2.452055 4.63438395 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 89.7 5e-19   NR KAF4655424.1 32597 g84362 i0 71 5.90476190476191 62 18 98.4 0 2 187 748 809 KAF4655424.1 hypothetical protein FOL46_008261 [Perkinsus olseni] diamond 1116 90.1 0.995560488346282 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28791918 28791918 PRJNA870096_S_NODE_122427_length_161_cov_1.220339_g120763_i0 PRJNA870096 122427 161 1.220339 1.96474579 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 62 1.94e-9   NR XP_002788346.1 423536 g120763 i0 68.3 0.763975155279503 41 13 76.4 0 156 34 690 730 XP_002788346.1 Stt3 protein, putative [Perkinsus marinus ATCC 50983] diamond 123 62 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;