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contig_metadata

26 rows where bioproject = "PRJNA870096", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 26 ✖

tax_clade 1

  • Sar · 26 ✖

bioproject 1

  • PRJNA870096 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2125175 2125175 PRJNA870096_S_NODE_17342_length_437_cov_16.604061_g15695_i0 PRJNA870096 17342 437 16.604061 72.55974657 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.042   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g15695 i0 100 0.128146453089245 28 0 6 0 1 28 14 41 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 56 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
9777219 9777219 PRJNA870096_S_NODE_102908_length_174_cov_2.053435_g101244_i0 PRJNA870096 102908 174 2.053435 3.5729769 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g101244 i0 100 0.160919540229885 28 0 16 0 1 28 12 39 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
9777388 9777388 PRJNA870096_S_NODE_11488_length_543_cov_8.344000_g9894_i0 PRJNA870096 11488 543 8.344 45.30792 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.015   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g9894 i0 100 0.0534069981583794 29 0 5 0 515 543 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
9777885 9777885 PRJNA870096_S_NODE_28968_length_333_cov_2.158621_g27304_i0 PRJNA870096 28968 333 2.158621 7.18820793 Polyplastron multivesiculatum 47894 SAR_Eukaryotes SAR_Eukaryotes 73.1 2.41e-8   NTclustered gi|92790171|emb|AJ965271.1| 47894 g27304 i0 84.722 0.648648648648649 72 11 22 0 4 75 283 354 Polyplastron multivesiculatum partial mRNA for Polyubiqutin 2 (polyubiqutin 2 gene) blastn 216 73.1 1 Eukaryota Sar   Ciliophora Litostomatea Entodiniomorphida Ophryoscolecidae Polyplastron Polyplastron multivesiculatum
12329554 12329554 PRJNA870096_S_NODE_69950_length_209_cov_2.325301_g68286_i0 PRJNA870096 69950 209 2.325301 4.85987909 Entodinium caudatum 47911 SAR_Eukaryotes SAR_Eukaryotes 111 2.98e-20   NTclustered gi|6010094|emb|AJ270227.1| 47911 g68286 i0 79.503 0.770334928229665 161 29 76 4 29 187 126 284 Entodinium caudatum partial mRNA for histone H2, clone L41 blastn 161 111 1 Eukaryota Sar   Ciliophora Litostomatea Entodiniomorphida Ophryoscolecidae Entodinium Entodinium caudatum
14878513 14878513 PRJNA870096_S_NODE_76352_length_200_cov_9.140127_g74688_i0 PRJNA870096 76352 200 9.140127 18.280254 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.017   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g74688 i0 100 0.14 28 0 14 0 173 200 38 11 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
21252921 21252921 PRJNA870096_S_NODE_98877_length_177_cov_25.373134_g97213_i0 PRJNA870096 98877 177 25.373134 44.91044718 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.48e-5   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g97213 i0 97.222 0.68361581920904 36 1 20 0 142 177 47 12 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 121 62.1 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
23802569 23802569 PRJNA870096_S_NODE_6399_length_740_cov_10.357245_g5088_i0 PRJNA870096 6399 740 10.357245 76.643613 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.021   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g5088 i0 100 0.0391891891891892 29 0 4 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
24188818 24188818 PRJNA870096_S_NODE_31139_length_321_cov_2.043165_g29475_i0 PRJNA870096 31139 321 2.043165 6.55855965 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 105 8.209999999999998e-24   NR CAI2359974.1 5936 g29475 i0 76.9 5.7196261682243 65 15 60.7 0 102 296 3 67 CAI2359974.1 unnamed protein product [Moneuplotes crassus] diamond 1836 105 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
24188914 24188914 PRJNA870096_S_NODE_91159_length_184_cov_1.907801_g89495_i0 PRJNA870096 91159 184 1.907801 3.51035384 Philasterida 198613 SAR_Eukaryotes SAR_Eukaryotes 90.5 2.47e-19   NR KRX04628.1 266149 g89495 i0 71.2 18.6521739130435 52 15 84.8 0 3 158 273 324 KRX04628.1 P-loop containing nucleoside triphosphate hydrolase [Pseudocohnilembus persalinus] diamond 3432 91.3 0.991237677984666 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
25076132 25076132 PRJNA870096_S_NODE_36460_length_295_cov_1.742063_g34796_i0 PRJNA870096 36460 295 1.742063 5.13908585 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g34796 i0 100 0.193220338983051 29 0 10 0 267 295 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
26841982 26841982 PRJNA870096_S_NODE_110421_length_169_cov_1.142857_g108757_i0 PRJNA870096 110421 169 1.142857 1.93142833 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 46.2 8.33e-4   NR OMJ93078.1 5963 g108757 i0 46 3.53254437869822 50 24 88.8 1 151 2 217 263 OMJ93078.1 hypothetical protein SteCoe_4022 [Stentor coeruleus] diamond 597 46.2 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
27411206 27411206 PRJNA870096_S_NODE_26123_length_352_cov_5.427184_g24459_i0 PRJNA870096 26123 352 5.427184 19.10368768 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 109 3.03e-26   NR CAI2376147.1 5936 g24459 i0 49.1 3.33238636363636 106 51 90.3 3 2 319 206 308 CAI2376147.1 unnamed protein product [Moneuplotes crassus] diamond 1173 110 0.990909090909091 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
28231578 28231578 PRJNA870096_S_NODE_66346_length_215_cov_1.627907_g64682_i0 PRJNA870096 66346 215 1.627907 3.50000005 root 1 Root_unresolved Root_unresolved 103 6.94e-24   NR CAH04407.1 5939 g64682 i0 68.2 13.506976744186 66 21 92.1 0 214 17 377 442 CAH04407.1 tRNA splicing protein SPL1 [Euplotes vannus] diamond 2904 104 0.990384615384615 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vannus
28255236 28255236 PRJNA870096_S_NODE_137466_length_153_cov_0.872727_g135802_i0 PRJNA870096 137466 153 0.872727 1.33527231 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 64.7 1.98e-10   NR XP_004034468.1 5932 g135802 i0 60.8 5 51 20 100 0 1 153 77 127 XP_004034468.1 pescadillo family protein, putative [Ichthyophthirius multifiliis] diamond 765 64.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
28263262 28263262 PRJNA870096_S_NODE_51526_length_245_cov_1.975248_g49862_i0 PRJNA870096 51526 245 1.975248 4.8393576 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 96.3 5.3100000000000005e-21   NR XP_004032095.1 5932 g49862 i0 59.4 8.60816326530612 69 26 84.5 1 27 233 516 582 XP_004032095.1 protein phosphatase 2 catalytic alpha isoform, putative [Ichthyophthirius multifiliis] diamond 2109 96.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
28413297 28413297 PRJNA870096_S_NODE_78966_length_197_cov_1.870130_g77302_i0 PRJNA870096 78966 197 1.87013 3.6841561 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 49.3 9.94e-5   NR XP_001454496.1 5888 g77302 i0 47.4 0.868020304568528 57 21 77.7 2 163 11 742 795 XP_001454496.1 uncharacterized protein GSPATT00020752001 [Paramecium tetraurelia] diamond 171 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
28476389 28476389 PRJNA870096_S_NODE_21766_length_388_cov_1.979710_g20106_i0 PRJNA870096 21766 388 1.97971 7.6812748 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 90.5 2.22e-19   NR CAG9327896.1 1481888 g20106 i0 46.6 0.680412371134021 88 47 68 0 2 265 106 193 CAG9327896.1 unnamed protein product [Blepharisma stoltei] diamond 264 90.5 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
28484507 28484507 PRJNA870096_S_NODE_83266_length_192_cov_3.100671_g81602_i0 PRJNA870096 83266 192 3.100671 5.95328832 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 92.8 1.18e-21   NR CAD8097878.1 5886 g81602 i0 80 22.234375 55 11 85.9 0 191 27 139 193 CAD8097878.1 unnamed protein product [Paramecium primaurelia] diamond 4269 93.6 0.991452991452991 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
28989902 28989902 PRJNA870096_S_NODE_34188_length_305_cov_7.187023_g32524_i0 PRJNA870096 34188 305 7.187023 21.920420150000002 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 86.7 3.46e-20   NR CDW83329.1 5949 g32524 i0 70.4 1.51475409836066 54 16 53.1 0 239 78 1 54 CDW83329.1 40s ribosomal protein s29-like [Stylonychia lemnae] diamond 462 86.7 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
29612673 29612673 PRJNA870096_S_NODE_43870_length_267_cov_2.098214_g42206_i0 PRJNA870096 43870 267 2.098214 5.60223138 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.23e-4   NR XP_001009911.1 312017 g42206 i0 46.8 0.696629213483146 62 31 69.7 1 11 196 295 354 XP_001009911.1 nucleic acid-binding protein, putative [Tetrahymena thermophila SB210] diamond 186 50.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29834043 29834043 PRJNA870096_S_NODE_40931_length_277_cov_2.743590_g39267_i0 PRJNA870096 40931 277 2.74359 7.5997443 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 137 9.28e-39   NR CAG9318382.1 1481888 g39267 i0 63.3 0.974729241877256 90 33 97.5 0 3 272 34 123 CAG9318382.1 unnamed protein product [Blepharisma stoltei] diamond 270 137 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
30948159 30948159 PRJNA870096_S_NODE_116254_length_165_cov_1.180328_g114590_i0 PRJNA870096 116254 165 1.180328 1.9475412 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 88.6 9.4e-19   NR KRX10336.1 266149 g114590 i0 70.4 2.94545454545455 54 16 98.2 0 162 1 649 702 KRX10336.1 hypothetical protein PPERSA_02753 [Pseudocohnilembus persalinus] diamond 486 88.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31097699 31097699 PRJNA870096_S_NODE_139235_length_152_cov_1.321101_g137571_i0 PRJNA870096 139235 152 1.321101 2.00807352 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.00792   NR CDW79679.1 5949 g137571 i0 55 0.789473684210526 40 18 78.9 0 141 22 183 222 CDW79679.1 UNKNOWN [Stylonychia lemnae] diamond 120 43.1 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32054706 32054706 PRJNA870096_S_NODE_120398_length_162_cov_1.571429_g118734_i0 PRJNA870096 120398 162 1.571429 2.54571498 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.8 2.87e-7   NR OMJ74518.1 5963 g118734 i0 47.2 2.57407407407407 53 28 98.1 0 2 160 243 295 OMJ74518.1 hypothetical protein SteCoe_26520 [Stentor coeruleus] diamond 417 56.2 0.99288256227758 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
32718545 32718545 PRJNA870096_S_NODE_16360_length_451_cov_17.833333_g14715_i0 PRJNA870096 16360 451 17.833333 80.42833183 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 180 5.329999999999998e-55   NR CDW82785.1 5949 g14715 i0 75 22.290465631929 112 28 74.5 0 391 56 33 144 CDW82785.1 40s ribosomal protein [Stylonychia lemnae] diamond 10053 180 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;