RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA867519", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Promethearchaeota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA867519 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26611817 26611817 PRJNA867519_P_NODE_9301_length_369_cov_1.489865_g9147_i0 PRJNA867519 9301 369 1.489865 5.49760185 Promethearchaeota archaeon 2053489 Archaea Archaea 77.4 1.04e-13   NR MCK4381457.1 2053489 g9147 i0 39.1 0.934959349593496 115 65 92.7 4 2 343 392 502 MCK4381457.1 hypothetical protein [Promethearchaeota archaeon] diamond 345 77.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
26801897 26801897 PRJNA867519_P_NODE_30461_length_245_cov_0.895349_g30307_i0 PRJNA867519 30461 245 0.895349 2.19360505 Promethearchaeia archaeon 3067280 Archaea Archaea 60.8 1.54e-8   NR HMF30488.1 3067280 g30307 i0 34.8 5.00816326530612 69 45 84.5 0 3 209 238 306 HMF30488.1 MFS transporter [Promethearchaeia archaeon] diamond 1227 60.8 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
29865614 29865614 PRJNA867519_P_NODE_7511_length_402_cov_2.951368_g7357_i0 PRJNA867519 7511 402 2.951368 11.86449936 Promethearchaeia archaeon 3067280 Archaea Archaea 76.3 2.38e-13   NR HEY0088341.1 3067280 g7357 i0 54.7 0.559701492537313 75 33 56 1 3 227 255 328 HEY0088341.1 GTP-binding protein [Promethearchaeia archaeon] diamond 225 76.3 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
32173440 32173440 PRJNA867519_P_NODE_6938_length_416_cov_2.206997_g6784_i0 PRJNA867519 6938 416 2.206997 9.18110752 Promethearchaeia archaeon 3067280 Archaea Archaea 45.8 0.0185   NR MEE9379182.1 3067280 g6784 i0 32.4 0.735576923076923 102 62 70.7 4 321 28 10 108 MEE9379182.1 methyltransferase domain-containing protein [Promethearchaeia archaeon] diamond 306 45.8 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;