RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA867519", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA867519 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28413233 28413233 PRJNA867519_P_NODE_1066_length_907_cov_3.513189_g937_i0 PRJNA867519 1066 907 3.513189 31.86462423 Rhabdoviridae sp. 1955137 Viruses Viruses 75.9 2.76e-11   NR XKB76561.1 1955137 g937 i0 30.3 0.588754134509372 178 116 57.6 4 146 667 255 428 XKB76561.1 MAG: hypothetical protein [Rhabdoviridae sp.] diamond 534 75.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Rhabdoviridae sp.
29171071 29171071 PRJNA867519_P_NODE_1669_length_754_cov_6.324523_g1523_i0 PRJNA867519 1669 754 6.324523 47.68690342 Wuhan Fly Virus 1 1608101 Viruses Viruses 72.4 5.96e-11   NR YP_009304999.1 1608101 g1523 i0 29.2 1.10610079575597 168 109 63.7 4 158 637 31 196 YP_009304999.1 nucleocapsid protein [Wuhan Fly Virus 1] diamond 834 72.4 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phasivirus Phasivirus wuhanense
30000206 30000206 PRJNA867519_P_NODE_19471_length_278_cov_1.385366_g19317_i0 PRJNA867519 19471 278 1.385366 3.85131748 Chuvivirus 2842604 Viruses Viruses 121 4.88e-30   NR WET19887.1 2842604 g19317 i0 64.1 1.98561151079137 92 33 99.3 0 3 278 267 358 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 552 121 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;