RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA867519", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA867519 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5951356 5951356 PRJNA867519_P_NODE_17305_length_287_cov_3.836449_g17151_i0 PRJNA867519 17305 287 3.836449 11.01060863 Skokie tombus-like virus 2789423 Viruses Viruses 497 2.84e-136   NTclustered gi|1933757594|gb|MW177751.1| 2789423 g17151 i0 97.909 1 287 6 100 0 1 287 16 302 Skokie tombus-like virus strain USAdp coat protein gene, partial cds blastn 287 497 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
18699425 18699425 PRJNA867519_P_NODE_2095_length_689_cov_1.383117_g1947_i0 PRJNA867519 2095 689 1.383117 9.52967613 Skokie tombus-like virus 2789423 Viruses Viruses 322 4.75e-83   NTclustered gi|1933757594|gb|MW177751.1| 2789423 g1947 i0 95.522 0.291727140783745 201 9 29 0 1 201 1069 1269 Skokie tombus-like virus strain USAdp coat protein gene, partial cds blastn 201 322 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;