RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA867519" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA867519 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26833734 26833734 PRJNA867519_P_NODE_33301_length_241_cov_1.434524_g33147_i0 PRJNA867519 33301 241 1.434524 3.45720284 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 109 1.26e-25   NR RMD63071.1 2762014 g33147 i0 64.1 0.970954356846473 78 28 97.1 0 236 3 348 425 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 234 109 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27781836 27781836 PRJNA867519_P_NODE_7744_length_397_cov_1.333333_g7590_i0 PRJNA867519 7744 397 1.333333 5.29333201 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 126 1.03e-30   NR RMD63071.1 2762014 g7590 i0 50.4 4.89672544080604 129 64 97.5 0 397 11 291 419 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 1944 126 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28791899 28791899 PRJNA867519_P_NODE_7667_length_399_cov_0.984663_g7513_i0 PRJNA867519 7667 399 0.984663 3.92880537 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 143 8.869999999999999e-37   NR RMD63071.1 2762014 g7513 i0 58.8 0.857142857142857 114 46 85.7 1 346 5 325 437 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 342 143 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29013379 29013379 PRJNA867519_P_NODE_23408_length_260_cov_2.026738_g23254_i0 PRJNA867519 23408 260 2.026738 5.2695188 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 102 4.6099999999999997e-23   NR RMD63071.1 2762014 g23254 i0 53.5 0.992307692307692 86 40 99.2 0 2 259 309 394 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 258 102 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30758412 30758412 PRJNA867519_P_NODE_32794_length_242_cov_0.911243_g32640_i0 PRJNA867519 32794 242 0.911243 2.20520806 Bacillati 1783272 Bacteria Bacteria 94.4 2.51e-20   NR RMD63071.1 2762014 g32640 i0 51.9 7.87190082644628 79 37 97.9 1 5 241 331 408 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 1905 95.1 0.992639327024185 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31825005 31825005 PRJNA867519_P_NODE_5497_length_461_cov_1.587629_g5343_i0 PRJNA867519 5497 461 1.587629 7.31896969 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 141 9.66e-36   NR RMD63071.1 2762014 g5343 i0 48.6 1.95227765726681 148 70 96.3 3 448 5 358 499 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 900 141 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;