RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA867519", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA867519 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27023474 27023474 PRJNA867519_P_NODE_16562_length_291_cov_1.871560_g16408_i0 PRJNA867519 16562 291 1.87156 5.4462396 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 89.4 3.45e-20   NR MEK6953603.1 2250274 g16408 i0 57.1 1.43298969072165 70 30 72.2 0 80 289 2 71 MEK6953603.1 AIR carboxylase family protein [Candidatus Micrarchaeota archaeon] diamond 417 89.4 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
28002929 28002929 PRJNA867519_P_NODE_27065_length_249_cov_0.875000_g26911_i0 PRJNA867519 27065 249 0.875 2.17875 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 104 1.01e-25   NR MCX6774292.1 2250274 g26911 i0 67.1 4.90361445783132 79 23 95.2 1 10 246 132 207 MCX6774292.1 dihydrodipicolinate reductase [Candidatus Micrarchaeota archaeon] diamond 1221 104 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;