RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA867519" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA867519 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28002936 28002936 PRJNA867519_P_NODE_30985_length_244_cov_1.485380_g30831_i0 PRJNA867519 30985 244 1.48538 3.6243272 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 52 2.06e-5   NR HZR80031.1 2838779 g30831 i0 47.2 0.651639344262295 53 23 65.2 2 219 61 389 436 HZR80031.1 carboxylesterase family protein [Candidatus Binatia bacterium] diamond 159 52 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32521564 32521564 PRJNA867519_P_NODE_25119_length_252_cov_1.290503_g24965_i0 PRJNA867519 25119 252 1.290503 3.25206756 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 104 3.9099999999999996e-24   NR HJQ85590.1 2838779 g24965 i0 60.7 4.97619047619048 84 29 98.8 3 2 250 134 214 HJQ85590.1 alkyl sulfatase dimerization domain-containing protein [Candidatus Binatia bacterium] diamond 1254 104 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32867746 32867746 PRJNA867519_P_NODE_1740_length_742_cov_3.100149_g1594_i0 PRJNA867519 1740 742 3.100149 23.00310558 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 103 3.6100000000000005e-21   NR MDG2306452.1 2838779 g1594 i0 34.5 0.784366576819407 194 112 76.8 5 742 173 400 582 MDG2306452.1 sulfatase-like hydrolase/transferase [Candidatus Binatia bacterium] diamond 582 103 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;