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contig_metadata

27 rows where bioproject = "PRJNA867519", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 27 ✖

tax_kingdom 1

  • Pseudomonadati · 27 ✖

bioproject 1

  • PRJNA867519 · 27 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9776101 9776101 PRJNA867519_P_NODE_27008_length_249_cov_1.045455_g26854_i0 PRJNA867519 27008 249 1.045455 2.60318295 Bdellovibrionota 3018035 Bacteria Bacteria 71.6 1.58e-12   NR WP_015469088.1 453816 g26854 i0 47.1 2.02409638554217 85 41 100 2 249 1 213 295 WP_015469088.1 ABC transporter ATP-binding protein [Pseudobdellovibrio exovorus] diamond 504 72 0.994444444444444 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio exovorus
22524833 22524833 PRJNA867519_P_NODE_26438_length_250_cov_0.870056_g26284_i0 PRJNA867519 26438 250 0.870056 2.17514 Pseudobacteriovorax sp. 2020859 Bacteria Bacteria 56.6 4.58e-7   NR NRA66637.1 2020859 g26284 i0 36.5 0.756 63 40 75.6 0 13 201 245 307 NRA66637.1 RluA family pseudouridine synthase [Pseudobacteriovorax sp.] diamond 189 56.6 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Pseudobacteriovoracaceae Pseudobacteriovorax Pseudobacteriovorax sp.
22524890 22524890 PRJNA867519_P_NODE_34338_length_229_cov_2.871795_g34184_i0 PRJNA867519 34338 229 2.871795 6.57641055 root 1 Root_unresolved Root_unresolved 109 8.81e-29   NR HWU43760.1 28201 g34184 i0 71.2 9.55021834061135 73 21 95.6 0 228 10 50 122 HWU43760.1 hypothetical protein [Bdellovibrio sp.] diamond 2187 110 0.990909090909091 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
27339761 27339761 PRJNA867519_P_NODE_17843_length_285_cov_1.452830_g17689_i0 PRJNA867519 17843 285 1.45283 4.1405655 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 92.4 2.3400000000000003e-21   NR MCB0356052.1 2053517 g17689 i0 53.7 1 95 44 100 0 285 1 62 156 MCB0356052.1 hypothetical protein [Bdellovibrionales bacterium] diamond 285 92.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27434622 27434622 PRJNA867519_P_NODE_33123_length_242_cov_0.911243_g32969_i0 PRJNA867519 33123 242 0.911243 2.20520806 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 78.2 1.12e-14   NR MBC62697.1 2026715 g32969 i0 55.2 0.830578512396694 67 29 83.1 1 238 38 374 439 MBC62697.1 3-deoxy-7-phosphoheptulonate synthase class II [Pseudobdellovibrionaceae bacterium] diamond 201 78.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
27750378 27750378 PRJNA867519_P_NODE_34304_length_230_cov_2.859873_g34150_i0 PRJNA867519 34304 230 2.859873 6.5777079 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 43.5 0.0113   NR MCB0420120.1 2053517 g34150 i0 49 0.639130434782609 49 21 63.9 1 42 188 117 161 MCB0420120.1 hypothetical protein [Bdellovibrionales bacterium] diamond 147 43.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28034437 28034437 PRJNA867519_P_NODE_31445_length_244_cov_0.900585_g31291_i0 PRJNA867519 31445 244 0.900585 2.1974274 Oligoflexia bacterium 2599941 Bacteria Bacteria 78.2 1.11e-14   NR MBF0366287.1 2599941 g31291 i0 48.7 0.959016393442623 78 39 95.9 1 236 3 154 230 MBF0366287.1 hypothetical protein [Oligoflexia bacterium] diamond 234 78.2 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
28129118 28129118 PRJNA867519_P_NODE_18025_length_284_cov_1.668246_g17871_i0 PRJNA867519 18025 284 1.668246 4.73781864 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 134 7.67e-37   NR MBX9702835.1 2654442 g17871 i0 60.4 0.961267605633803 91 36 96.1 0 11 283 125 215 MBX9702835.1 protein kinase [Silvanigrellaceae bacterium] diamond 273 134 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
28129122 28129122 PRJNA867519_P_NODE_20805_length_272_cov_1.547739_g20651_i0 PRJNA867519 20805 272 1.547739 4.20985008 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 117 1.4099999999999998e-31   NR MCB0368223.1 2053517 g20651 i0 71.8 1.72058823529412 78 22 86 0 38 271 13 90 MCB0368223.1 cation transporting ATPase C-terminal domain-containing protein [Bdellovibrionales bacterium] diamond 468 117 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28728962 28728962 PRJNA867519_P_NODE_25367_length_251_cov_0.865169_g25213_i0 PRJNA867519 25367 251 0.865169 2.17157419 Micavibrio sp. 2024841 Bacteria Bacteria 88.2 1.23e-18   NR MDB5491936.1 2024841 g25213 i0 52.6 0.908366533864542 76 34 88.4 1 29 250 20 95 MDB5491936.1 Thioredoxin protein EC-YbbN [Micavibrio sp.] diamond 228 88.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
28981718 28981718 PRJNA867519_P_NODE_19908_length_276_cov_1.458128_g19754_i0 PRJNA867519 19908 276 1.458128 4.02443328 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 59.7 6.05e-8   NR MFT6631004.1 2081706 g19754 i0 59.1 0.478260869565217 44 18 47.8 0 6 137 834 877 MFT6631004.1 alpha-tubulin suppressor-like RCC1 family protein [Bacteriovoracaceae bacterium] diamond 132 59.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29139649 29139649 PRJNA867519_P_NODE_29889_length_246_cov_0.890173_g29735_i0 PRJNA867519 29889 246 0.890173 2.18982558 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 114 1.16e-29   NR MCB0369154.1 2053517 g29735 i0 88.5 0.74390243902439 61 7 74.4 0 61 243 27 87 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 183 114 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29557799 29557799 PRJNA867519_P_NODE_3130_length_584_cov_1.538160_g2979_i0 PRJNA867519 3130 584 1.53816 8.9828544 Bdellovibrio 958 Bacteria Bacteria 81.6 3.68e-14   NR WP_374073635.1 958 g2979 i0 44.8 2.95376712328767 96 52 49.3 1 576 289 110 204 WP_374073635.1 MULTISPECIES: hypothetical protein [Bdellovibrio] diamond 1725 81.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio  
29715529 29715529 PRJNA867519_P_NODE_24410_length_255_cov_2.104396_g24256_i0 PRJNA867519 24410 255 2.104396 5.3662098 Pseudomonadati 3379134 Bacteria Bacteria 50.1 1.07e-4   NR MBH48102.1 2020862 g24256 i0 38.2 1.50588235294118 68 42 80 0 254 51 325 392 MBH48102.1 hypothetical protein [Halobacteriovorax sp.] diamond 384 50.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae Halobacteriovorax Halobacteriovorax sp.
29960336 29960336 PRJNA867519_P_NODE_231_length_1561_cov_2.313844_g167_i0 PRJNA867519 231 1561 2.313844 36.11910484 Bdellovibrio sp. BCCA 3136281 Bacteria Bacteria 325 1.2700000000000002e-97   NR WP_340592901.1 3136281 g167 i0 43.2 0.836002562459962 435 230 82.4 8 1418 132 459 882 WP_340592901.1 hypothetical protein [Bdellovibrio sp. BCCA] diamond 1305 325 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. BCCA
29992042 29992042 PRJNA867519_P_NODE_9391_length_367_cov_3.115646_g9237_i0 PRJNA867519 9391 367 3.115646 11.43442082 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 71.6 1.17e-11   NR MEZ4704431.1 3034175 g9237 i0 60.4 0.866485013623978 53 17 43.3 1 16 174 507 555 MEZ4704431.1 hypothetical protein [Bdellovibrionota bacterium] diamond 318 71.6 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30023743 30023743 PRJNA867519_P_NODE_33331_length_241_cov_1.321429_g33177_i0 PRJNA867519 33331 241 1.321429 3.18464389 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 128 2.7e-35   NR MCB0369154.1 2053517 g33177 i0 77.2 0.983402489626556 79 18 98.3 0 5 241 27 105 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 237 128 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30379589 30379589 PRJNA867519_P_NODE_29132_length_247_cov_0.885057_g28978_i0 PRJNA867519 29132 247 0.885057 2.18609079 Pseudomonadati 3379134 Bacteria Bacteria 78.6 8.98e-15   NR WP_142408910.1 960 g28978 i0 51.9 2.95141700404858 79 37 96 1 2 238 307 384 WP_142408910.1 RCC1 domain-containing protein [Bacteriovorax stolpii] diamond 729 78.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
30379597 30379597 PRJNA867519_P_NODE_9572_length_364_cov_2.182131_g9418_i0 PRJNA867519 9572 364 2.182131 7.94295684 Pseudomonadati 3379134 Bacteria Bacteria 67.8 2.21e-10   NR NOT78266.1 2081706 g9418 i0 56.7 2.28296703296703 60 22 49.5 1 363 184 249 304 NOT78266.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 831 67.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
30623694 30623694 PRJNA867519_P_NODE_3293_length_572_cov_4.673347_g3142_i0 PRJNA867519 3293 572 4.673347 26.73154484 Micavibrio sp. 2024841 Bacteria Bacteria 145 5.55e-41   NR GJL85093.1 2024841 g3142 i0 58.1 1.28496503496504 124 51 64.5 1 199 567 2 125 GJL85093.1 MAG: group 1 truncated hemoglobin [Micavibrio sp.] diamond 735 145 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
30845095 30845095 PRJNA867519_P_NODE_13394_length_319_cov_1.252033_g13240_i0 PRJNA867519 13394 319 1.252033 3.99398527 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 98.6 2.33e-21   NR MEZ4704431.1 3034175 g13240 i0 48.1 0.978056426332288 104 46 97.8 3 1 312 686 781 MEZ4704431.1 hypothetical protein [Bdellovibrionota bacterium] diamond 312 98.6 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30853135 30853135 PRJNA867519_P_NODE_29214_length_247_cov_0.885057_g29060_i0 PRJNA867519 29214 247 0.885057 2.18609079 Bdellovibrionota 3018035 Bacteria Bacteria 79.3 5.33e-15   NR MBL7689555.1 2026715 g29060 i0 52.5 4.90688259109312 80 37 97.2 1 243 4 2660 2738 MBL7689555.1 putative Ig domain-containing protein [Pseudobdellovibrionaceae bacterium] diamond 1212 79.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
31453842 31453842 PRJNA867519_P_NODE_16696_length_290_cov_1.543779_g16542_i0 PRJNA867519 16696 290 1.543779 4.4769591 Bdellovibrio 958 Bacteria Bacteria 112 5.1e-27   NR MBC7420993.1 28201 g16542 i0 72.2 8.18275862068966 79 22 81.7 0 285 49 301 379 MBC7420993.1 cystathionine gamma-synthase [Bdellovibrio sp.] diamond 2373 113 0.991150442477876 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
31769977 31769977 PRJNA867519_P_NODE_29597_length_246_cov_0.890173_g29443_i0 PRJNA867519 29597 246 0.890173 2.18982558 Bacteriovorax 146784 Bacteria Bacteria 133 1.19e-35   NR WP_102243161.1 960 g29443 i0 76.5 2.95121951219512 81 19 98.8 0 245 3 81 161 WP_102243161.1 branched-chain amino acid aminotransferase [Bacteriovorax stolpii] diamond 726 134 0.992537313432836 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
32268285 32268285 PRJNA867519_P_NODE_15698_length_298_cov_1.386667_g15544_i0 PRJNA867519 15698 298 1.386667 4.13226766 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 60.5 7.42e-10   NR MCB0369947.1 2053517 g15544 i0 54.2 1.51006711409396 48 21 48.3 1 276 133 2 48 MCB0369947.1 hypothetical protein [Bdellovibrionales bacterium] diamond 450 60.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32781296 32781296 PRJNA867519_P_NODE_33680_length_241_cov_0.916667_g33526_i0 PRJNA867519 33680 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 72 1.79e-12   NR WP_374073635.1 958 g33526 i0 46.8 6.77178423236515 77 40 95.9 1 237 7 734 809 WP_374073635.1 MULTISPECIES: hypothetical protein [Bdellovibrio] diamond 1632 72 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio  
32899146 32899146 PRJNA867519_P_NODE_19040_length_280_cov_1.285024_g18886_i0 PRJNA867519 19040 280 1.285024 3.5980672 Bacteriovorax sp. HI3 2984118 Bacteria Bacteria 129 7.149999999999998e-35   NR BDT27732.1 2984118 g18886 i0 75.3 0.910714285714286 85 21 91.1 0 3 257 57 141 BDT27732.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Bacteriovorax sp. HI3] diamond 255 129 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp. HI3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;