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contig_metadata

25 rows where bioproject = "PRJNA867519" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 25 ✖

bioproject 1

  • PRJNA867519 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8501025 8501025 PRJNA867519_P_NODE_28067_length_248_cov_0.880000_g27913_i0 PRJNA867519 28067 248 0.88 2.1824 Halococcus dombrowskii 179637 Archaea Archaea 381 2.519999999999999e-101   NTclustered gi|2221489803|gb|CP095005.1| 179637 g27913 i0 94.355 10.6693548387097 248 14 100 0 1 248 2199354 2199107 Halococcus dombrowskii strain H4 chromosome, complete genome blastn 2646 381 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
11051725 11051725 PRJNA867519_P_NODE_10829_length_348_cov_0.756364_g10675_i0 PRJNA867519 10829 348 0.756364 2.63214672 Natrinema caseinilyticum 2961570 Archaea Archaea 54.7 0.009   NTclustered gi|2270264148|gb|CP100445.1| 2961570 g10675 i0 88.889 0.129310344827586 45 3 13 1 279 323 1452581 1452539 Natrinema caseinilyticum strain ZJ2 chromosome, complete genome blastn 45 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema caseinilyticum
13601861 13601861 PRJNA867519_P_NODE_33691_length_241_cov_0.916667_g33537_i0 PRJNA867519 33691 241 0.916667 2.20916747 Halorubrum ruber 2982524 Archaea Archaea 58.4 4.66e-4   NTclustered gi|2031421124|gb|CP073695.1| 2982524 g33537 i0 94.737 0.684647302904564 38 1 15 1 123 159 2731878 2731915 Halorubrum ruber strain MBLA0099 chromosome, complete genome blastn 165 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ruber
14876027 14876027 PRJNA867519_P_NODE_14112_length_312_cov_1.610879_g13958_i0 PRJNA867519 14112 312 1.610879 5.02594248 Methanobacteriota archaeon 2026739 Archaea Archaea 149 6.979999999999997e-42   NR MBH33411.1 2026739 g13958 i0 77.8 2.55769230769231 90 20 86.5 0 9 278 200 289 MBH33411.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 798 149 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
26960050 26960050 PRJNA867519_P_NODE_16022_length_295_cov_2.337838_g15868_i0 PRJNA867519 16022 295 2.337838 6.8966221 Methanobacteriota archaeon 2026739 Archaea Archaea 92.4 2.56e-19   NR MBU38768.1 2026739 g15868 i0 50.6 0.905084745762712 89 44 90.5 0 294 28 2303 2391 MBU38768.1 hypothetical protein [Methanobacteriota archaeon] diamond 267 92.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27339762 27339762 PRJNA867519_P_NODE_19823_length_276_cov_1.896552_g19669_i0 PRJNA867519 19823 276 1.896552 5.23448352 Methanobrevibacter sp. 66852 Archaea Archaea 84.7 1.01e-16   NR WP_292800363.1 66852 g19669 i0 39.6 1.04347826086957 96 53 98.9 2 276 4 906 1001 WP_292800363.1 hypothetical protein [Methanobrevibacter sp.] diamond 288 84.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27339777 27339777 PRJNA867519_P_NODE_3103_length_586_cov_2.239766_g2952_i0 PRJNA867519 3103 586 2.239766 13.12502876 Candidatus Thalassarchaeum sp. 3134679 Archaea Archaea 80.9 7.1e-14   NR MCH2637131.1 3134679 g2952 i0 52.6 0.783276450511945 76 35 38.4 1 559 335 39 114 MCH2637131.1 alpha-amylase family glycosyl hydrolase [Candidatus Thalassarchaeum sp.] diamond 459 80.9 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae Candidatus Thalassarchaeum Candidatus Thalassarchaeum sp.
27624029 27624029 PRJNA867519_P_NODE_324_length_1408_cov_2.946067_g247_i0 PRJNA867519 324 1408 2.946067 41.48062336 Methanosarcinales archaeon 2250255 Archaea Archaea 203 9.84e-53   NR MCD4768356.1 2250255 g247 i0 39 2.26704545454545 362 199 75.4 10 2 1063 4 351 MCD4768356.1 tandem-95 repeat protein [Methanosarcinales archaeon] diamond 3192 203 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28413242 28413242 PRJNA867519_P_NODE_16506_length_292_cov_1.022831_g16352_i0 PRJNA867519 16506 292 1.022831 2.98666652 Archaeoglobales archaeon 2250258 Archaea Archaea 113 5.9000000000000005e-27   NR RLI79115.1 2250258 g16352 i0 56.7 8.10616438356164 104 33 99.7 2 292 2 156 254 RLI79115.1 MAG: imidazole glycerol phosphate synthase HisHF [Archaeoglobales archaeon] diamond 2367 113 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales     Archaeoglobales archaeon
28791901 28791901 PRJNA867519_P_NODE_8387_length_384_cov_1.745981_g8233_i0 PRJNA867519 8387 384 1.745981 6.70456704 Thermoplasmatota archaeon 2806419 Archaea Archaea 84.7 3.72e-16   NR MEW5936266.1 2806419 g8233 i0 50.6 2.0703125 89 44 69.5 0 2 268 605 693 MEW5936266.1 putative Ig domain-containing protein [Thermoplasmatota archaeon] diamond 795 84.7 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28950139 28950139 PRJNA867519_P_NODE_20548_length_273_cov_1.875000_g20394_i0 PRJNA867519 20548 273 1.875 5.11875 Salinigranum sp. 1966351 Archaea Archaea 46.6 8.6e-4   NR WP_372909564.1 1966351 g20394 i0 41.2 2.23076923076923 68 34 72.5 2 22 219 26 89 WP_372909564.1 ester cyclase [Salinigranum sp.] diamond 609 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinigranum Salinigranum sp.
29076406 29076406 PRJNA867519_P_NODE_6768_length_421_cov_1.583333_g6614_i0 PRJNA867519 6768 421 1.583333 6.66583193 Methanocaldococcus indicus 213231 Archaea Archaea 45.1 0.032   NR XMY58652.1 213231 g6614 i0 34.5 0.847980997624703 119 64 81.9 6 57 401 172 280 XMY58652.1 60S ribosomal export protein NMD3 [Methanocaldococcus indicus] diamond 357 45.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus indicus
29454751 29454751 PRJNA867519_P_NODE_3310_length_571_cov_2.190763_g3159_i0 PRJNA867519 3310 571 2.190763 12.50925673 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 91.7 1.95e-19   NR WP_297983794.1 253161 g3159 i0 34.6 0.956217162872154 182 111 93 5 1 531 3 181 WP_297983794.1 translationally-controlled tumor protein [uncultured Methanobrevibacter sp.] diamond 546 91.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
29557785 29557785 PRJNA867519_P_NODE_10550_length_351_cov_1.568345_g10396_i0 PRJNA867519 10550 351 1.568345 5.50489095 Methanobacteriati 3366610 Archaea Archaea 48.5 0.00101   NR MDP6626642.1 2599940 g10396 i0 30.5 3.13675213675214 95 63 78.6 2 32 307 206 300 MDP6626642.1 mechanosensitive ion channel family protein [Methanopyri archaeon] diamond 1101 48.9 0.991820040899796 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanopyri       Methanopyri archaeon
29612641 29612641 PRJNA867519_P_NODE_31050_length_244_cov_0.900585_g30896_i0 PRJNA867519 31050 244 0.900585 2.1974274 Candidatus Poseidoniaceae archaeon 2666346 Archaea Archaea 53.5 1.34e-6   NR HJL96603.1 2666346 g30896 i0 60 1.94262295081967 40 16 49.2 0 243 124 99 138 HJL96603.1 TM2 domain-containing protein [Candidatus Poseidoniaceae archaeon] diamond 474 53.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae   Candidatus Poseidoniaceae archaeon
30031746 30031746 PRJNA867519_P_NODE_26211_length_250_cov_0.870056_g26057_i0 PRJNA867519 26211 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 42.7 0.0372   NR NYT17884.1 2184052 g26057 i0 41.5 1.476 53 31 63.6 0 240 82 65 117 NYT17884.1 DNA double-strand break repair nuclease NurA [Methanomicrobiales archaeon] diamond 369 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
30221123 30221123 PRJNA867519_P_NODE_22572_length_264_cov_1.581152_g22418_i0 PRJNA867519 22572 264 1.581152 4.17424128 Methanobacteriota 28890 Archaea Archaea 48.5 8.77e-5   NR MDG6244987.1 1874737 g22418 i0 45.5 2.78409090909091 44 24 50 0 209 78 1 44 MDG6244987.1 DUF4870 domain-containing protein [Methanolobus sp.] diamond 735 48.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp.
30528984 30528984 PRJNA867519_P_NODE_16713_length_290_cov_1.419355_g16559_i0 PRJNA867519 16713 290 1.419355 4.1161295 Methanobacteriota archaeon 2026739 Archaea Archaea 110 1.52e-26   NR RMF88911.1 2026739 g16559 i0 53.2 5.90689655172414 94 44 97.2 0 1 282 237 330 RMF88911.1 MAG: molecular chaperone DnaJ, partial [Methanobacteriota archaeon] diamond 1713 110 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30655384 30655384 PRJNA867519_P_NODE_6833_length_419_cov_2.017341_g6679_i0 PRJNA867519 6833 419 2.017341 8.45265879 Methanoregulaceae archaeon 2485498 Archaea Archaea 69.7 9.59e-11   NR HNJ81026.1 2485498 g6679 i0 53.3 0.429594272076372 60 26 43 1 203 382 603 660 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 180 69.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
31350793 31350793 PRJNA867519_P_NODE_12656_length_327_cov_1.007874_g12502_i0 PRJNA867519 12656 327 1.007874 3.29574798 Thermoplasmata archaeon 1906666 Archaea Archaea 43.9 0.0344   NR MCK5253513.1 1906666 g12502 i0 35.6 0.541284403669725 59 35 54.1 1 101 277 219 274 MCK5253513.1 hypothetical protein [Thermoplasmata archaeon] diamond 177 43.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31477404 31477404 PRJNA867519_P_NODE_27576_length_249_cov_0.875000_g27422_i0 PRJNA867519 27576 249 0.875 2.17875 Methanosarcinales archaeon 2250255 Archaea Archaea 50.8 5.57e-5   NR HID27252.1 2250255 g27422 i0 40.4 0.686746987951807 57 34 68.7 0 77 247 551 607 HID27252.1 amino acid permease [Methanosarcinales archaeon] diamond 171 50.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31951680 31951680 PRJNA867519_P_NODE_9857_length_360_cov_1.212544_g9703_i0 PRJNA867519 9857 360 1.212544 4.3651584 Methanobacteriota archaeon 2026739 Archaea Archaea 56.2 2.44e-6   NR MBT3441953.1 2026739 g9703 i0 49.2 4.29166666666667 61 30 50.8 1 118 300 154 213 MBT3441953.1 hypothetical protein [Methanobacteriota archaeon] diamond 1545 56.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32173422 32173422 PRJNA867519_P_NODE_26318_length_250_cov_0.870056_g26164_i0 PRJNA867519 26318 250 0.870056 2.17514 Methanoregula sp. 2052170 Archaea Archaea 56.6 5.35e-7   NR MDD1700180.1 2052170 g26164 i0 40.3 0.924 77 46 92.4 0 20 250 333 409 MDD1700180.1 PKD domain-containing protein [Methanoregula sp.] diamond 231 56.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32529587 32529587 PRJNA867519_P_NODE_5199_length_473_cov_2.097500_g5045_i0 PRJNA867519 5199 473 2.0975 9.921175 Methanobacteriati 3366610 Archaea Archaea 67 1.64e-9   NR MAV07334.1 2026739 g5045 i0 56.4 1.3953488372093 55 23 34.9 1 12 176 53 106 MAV07334.1 hypothetical protein [Methanobacteriota archaeon] diamond 660 67 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32592615 32592615 PRJNA867519_P_NODE_14319_length_310_cov_2.278481_g14165_i0 PRJNA867519 14319 310 2.278481 7.0632911 root 1 Root_unresolved Root_unresolved 84.7 1.39e-16   NR WP_232700914.1 2902623 g14165 i0 48.8 3.14516129032258 86 42 81.3 2 39 290 5 90 WP_232700914.1 hydroxysqualene dehydroxylase [Halobacterium wangiae] diamond 975 84.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium wangiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;