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contig_metadata

30 rows where bioproject = "PRJNA867519", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 30 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 30 ✖

bioproject 1

  • PRJNA867519 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4676532 4676532 PRJNA867519_P_NODE_25044_length_252_cov_1.720670_g24890_i0 PRJNA867519 25044 252 1.72067 4.3360884 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 106 4.66e-25   NR KAB2647198.1 2026799 g24890 i0 66.7 2.78571428571429 78 26 92.9 0 239 6 1 78 KAB2647198.1 MAG: phosphoglycerate kinase [Verrucomicrobiota bacterium] diamond 702 106 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
5951354 5951354 PRJNA867519_P_NODE_17085_length_288_cov_2.562791_g16931_i0 PRJNA867519 17085 288 2.562791 7.38083808 Nibricoccus aquaticus 2576891 Bacteria Bacteria 56.5 0.002   NTclustered gi|1243404978|gb|CP023344.1| 2576891 g16931 i0 96.97 0.114583333333333 33 1 11 0 155 187 3609963 3609995 Nibricoccus aquaticus strain HZ-65 chromosome, complete genome blastn 33 56.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Nibricoccus Nibricoccus aquaticus
14876224 14876224 PRJNA867519_P_NODE_8172_length_389_cov_0.974684_g8018_i0 PRJNA867519 8172 389 0.974684 3.79152076 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 144 2.4899999999999998e-39   NR RYD65414.1 2026800 g8018 i0 81.6 1.19537275064267 76 14 58.6 0 2 229 260 335 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 465 144 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
16150704 16150704 PRJNA867519_P_NODE_16773_length_290_cov_1.336406_g16619_i0 PRJNA867519 16773 290 1.336406 3.8755774 Luteolibacter ambystomatis 2824561 Bacteria Bacteria 222 1.9299999999999999e-53   NTclustered gi|2029343589|gb|CP073100.1| 2824561 g16619 i0 83.004 83.9379310344828 253 36 87 7 3 253 422697 422944 Luteolibacter ambystomatis strain 32A chromosome, complete genome blastn 24342 222 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter ambystomatis
21250290 21250290 PRJNA867519_P_NODE_26637_length_250_cov_0.870056_g26483_i0 PRJNA867519 26637 250 0.870056 2.17514 Luteolibacter sp. Populi 3230487 Bacteria Bacteria 62.1 3.76e-5   NTclustered gi|2774618348|gb|CP161812.1| 3230487 g26483 i0 97.222 2.188 36 1 14 0 207 242 5343715 5343750 Luteolibacter sp. Populi chromosome, complete genome blastn 547 62.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. Populi
26651503 26651503 PRJNA867519_P_NODE_22921_length_262_cov_2.544974_g22767_i0 PRJNA867519 22921 262 2.544974 6.66783188 Pseudomonadati 3379134 Bacteria Bacteria 57.8 2.16e-7   NR PYK82712.1 2026799 g22767 i0 56.8 1.54580152671756 44 19 50.4 0 253 122 288 331 PYK82712.1 MAG: peptidase M28 family protein, partial [Verrucomicrobiota bacterium] diamond 405 57.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
26714712 26714712 PRJNA867519_P_NODE_26181_length_250_cov_1.305085_g26027_i0 PRJNA867519 26181 250 1.305085 3.2627125 Bacteria 2 Bacteria Bacteria 55.5 1.36e-6   NR MBL9151878.1 2026801 g26027 i0 45.6 3.66 57 31 68.4 0 244 74 290 346 MBL9151878.1 choice-of-anchor I family protein [Verrucomicrobiales bacterium] diamond 915 55.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
26770298 26770298 PRJNA867519_P_NODE_15881_length_297_cov_0.946429_g15727_i0 PRJNA867519 15881 297 0.946429 2.81089413 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 43.5 0.0368   NR MBL9180466.1 2026800 g15727 i0 37.5 0.808080808080808 80 29 80.8 3 296 57 26 84 MBL9180466.1 hypothetical protein [Verrucomicrobiaceae bacterium] diamond 240 43.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
26801880 26801880 PRJNA867519_P_NODE_18401_length_283_cov_1.100000_g18247_i0 PRJNA867519 18401 283 1.1 3.113 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 45.1 0.00869   NR HLH56783.1 2499141 g18247 i0 31.6 0.837455830388693 79 46 76.3 2 5 220 181 258 HLH56783.1 endonuclease/exonuclease/phosphatase family protein [Verrucomicrobiia bacterium] diamond 237 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27023481 27023481 PRJNA867519_P_NODE_20382_length_274_cov_1.393035_g20228_i0 PRJNA867519 20382 274 1.393035 3.8169159 Prosthecobacter dejongeii 48465 Bacteria Bacteria 57.4 3.86e-7   NR WP_184208695.1 48465 g20228 i0 45.9 0.667883211678832 61 32 66.8 1 274 92 115 174 WP_184208695.1 prolyl oligopeptidase family serine peptidase [Prosthecobacter dejongeii] diamond 183 57.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter dejongeii
27086836 27086836 PRJNA867519_P_NODE_23682_length_259_cov_1.655914_g23528_i0 PRJNA867519 23682 259 1.655914 4.28881726 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 81.6 1.72e-16   NR MEW6302212.1 2026799 g23528 i0 48.2 2.94208494208494 85 24 98.5 1 257 3 187 251 MEW6302212.1 putative 4-mercaptohistidine N1-methyltransferase [Verrucomicrobiota bacterium] diamond 762 81.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27339757 27339757 PRJNA867519_P_NODE_16723_length_290_cov_1.419355_g16569_i0 PRJNA867519 16723 290 1.419355 4.1161295 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.9 0.0261   NR MBN2508589.1 2026799 g16569 i0 49 0.506896551724138 49 22 50.7 2 103 249 794 839 MBN2508589.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 147 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27497594 27497594 PRJNA867519_P_NODE_10583_length_351_cov_1.050360_g10429_i0 PRJNA867519 10583 351 1.05036 3.6867636 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 78.2 4.69e-14   NR HYG84357.1 2499141 g10429 i0 54.1 1.26495726495726 74 34 63.2 0 226 5 338 411 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 444 78.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27718958 27718958 PRJNA867519_P_NODE_11864_length_335_cov_2.026718_g11710_i0 PRJNA867519 11864 335 2.026718 6.7895053 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 70.9 1.34e-11   NR PYK78519.1 2026799 g11710 i0 41.1 1.61194029850746 90 44 80.6 3 328 59 327 407 PYK78519.1 MAG: sulfotransferase [Verrucomicrobiota bacterium] diamond 540 70.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27718998 27718998 PRJNA867519_P_NODE_32524_length_242_cov_1.437870_g32370_i0 PRJNA867519 32524 242 1.43787 3.4796454 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 45.4 0.00408   NR HYG84357.1 2499141 g32370 i0 32.9 0.942148760330578 76 49 94.2 1 235 8 111 184 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 228 45.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28097385 28097385 PRJNA867519_P_NODE_29205_length_247_cov_0.885057_g29051_i0 PRJNA867519 29205 247 0.885057 2.18609079 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 65.9 2.27e-10   NR MCC5849379.1 2026799 g29051 i0 51.5 0.801619433198381 66 32 80.2 0 1 198 265 330 MCC5849379.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 198 65.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28191891 28191891 PRJNA867519_P_NODE_13066_length_322_cov_1.855422_g12912_i0 PRJNA867519 13066 322 1.855422 5.97445884 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 62.4 2.32e-10   NR MCO5052453.1 2499141 g12912 i0 54.1 1.17391304347826 61 23 56.8 2 109 291 4 59 MCO5052453.1 cold-shock protein [Verrucomicrobiia bacterium] diamond 378 62.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28579276 28579276 PRJNA867519_P_NODE_29407_length_246_cov_1.583815_g29253_i0 PRJNA867519 29407 246 1.583815 3.8961849 Pseudomonadati 3379134 Bacteria Bacteria 102 3.8199999999999996e-23   NR MDF1860366.1 2026801 g29253 i0 56.8 3.95121951219512 81 35 98.8 0 2 244 56 136 MDF1860366.1 sulfatase-like hydrolase/transferase [Verrucomicrobiales bacterium] diamond 972 102 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
29076374 29076374 PRJNA867519_P_NODE_11868_length_335_cov_1.763359_g11714_i0 PRJNA867519 11868 335 1.763359 5.90725265 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 53.9 8.45e-6   NR MEY3480499.1 2026799 g11714 i0 32.7 5.30149253731343 107 71 94.9 1 324 7 77 183 MEY3480499.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 1776 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29328790 29328790 PRJNA867519_P_NODE_32129_length_243_cov_0.905882_g31975_i0 PRJNA867519 32129 243 0.905882 2.20129326 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 72.8 1.02e-12   NR MBI5687701.1 2026799 g31975 i0 46.3 1.96296296296296 80 42 97.5 1 237 1 171 250 MBI5687701.1 protein kinase [Verrucomicrobiota bacterium] diamond 477 72.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29683922 29683922 PRJNA867519_P_NODE_27550_length_249_cov_0.875000_g27396_i0 PRJNA867519 27550 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 78.2 1.28e-14   NR MDP3070172.1 2006848 g27396 i0 49.4 6.37349397590361 77 39 92.8 0 6 236 437 513 MDP3070172.1 serine hydrolase domain-containing protein [Opitutaceae bacterium] diamond 1587 78.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
30284822 30284822 PRJNA867519_P_NODE_27052_length_249_cov_0.875000_g26898_i0 PRJNA867519 27052 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 86.7 8.32e-19   NR HIL69446.1 2026799 g26898 i0 52.8 1.73493975903614 72 31 86.7 1 218 3 90 158 HIL69446.1 hydrolase TatD [Verrucomicrobiota bacterium] diamond 432 86.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30686958 30686958 PRJNA867519_P_NODE_9873_length_360_cov_0.993031_g9719_i0 PRJNA867519 9873 360 0.993031 3.5749116 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 90.5 2.89e-19   NR MDH7502297.1 2026799 g9719 i0 33.3 1 120 80 100 0 1 360 35 154 MDH7502297.1 slipin family protein [Verrucomicrobiota bacterium] diamond 360 90.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30813373 30813373 PRJNA867519_P_NODE_1214_length_863_cov_1.517722_g1080_i0 PRJNA867519 1214 863 1.517722 13.09794086 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 118 5.460000000000001e-26   NR HYG84357.1 2499141 g1080 i0 43 0.597914252607184 172 95 59.1 2 328 837 19 189 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 516 118 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30940005 30940005 PRJNA867519_P_NODE_34454_length_226_cov_2.013072_g34300_i0 PRJNA867519 34454 226 2.013072 4.54954272 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 47 9.79e-4   NR HEY0551083.1 2499141 g34300 i0 50 0.47787610619469 36 18 47.8 0 219 112 737 772 HEY0551083.1 PAS domain S-box protein [Verrucomicrobiia bacterium] diamond 108 47 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31224011 31224011 PRJNA867519_P_NODE_33355_length_241_cov_0.916667_g33201_i0 PRJNA867519 33355 241 0.916667 2.20916747 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 44.7 0.00795   NR MBL9135107.1 2026801 g33201 i0 41.2 0.846473029045643 68 38 82.2 1 2 199 1603 1670 MBL9135107.1 tandem-95 repeat protein [Verrucomicrobiales bacterium] diamond 204 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
31287336 31287336 PRJNA867519_P_NODE_33615_length_241_cov_0.916667_g33461_i0 PRJNA867519 33615 241 0.916667 2.20916747 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 45.4 0.00389   NR MEM9480605.1 2026799 g33461 i0 40.3 1.94190871369295 77 37 95.9 3 4 234 72 139 MEM9480605.1 2-enoyl thioester reductase domain-containing protein [Verrucomicrobiota bacterium] diamond 468 45.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31825008 31825008 PRJNA867519_P_NODE_6997_length_415_cov_1.470760_g6843_i0 PRJNA867519 6997 415 1.47076 6.103654 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 76.3 4.55e-13   NR HYG84357.1 2499141 g6843 i0 36.3 1.79277108433735 124 79 89.6 0 380 9 343 466 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 744 76.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31983238 31983238 PRJNA867519_P_NODE_12098_length_333_cov_1.173077_g11944_i0 PRJNA867519 12098 333 1.173077 3.90634641 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 85.5 1.02e-16   NR HYG84357.1 2499141 g11944 i0 44 1.12612612612613 125 50 94.6 4 317 3 225 349 HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 375 85.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32394781 32394781 PRJNA867519_P_NODE_28399_length_248_cov_0.874286_g28245_i0 PRJNA867519 28399 248 0.874286 2.16822928 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 120 6.93e-32   NR MBV8102014.1 2026799 g28245 i0 73 0.895161290322581 74 20 89.5 0 3 224 126 199 MBV8102014.1 cysteine hydrolase [Verrucomicrobiota bacterium] diamond 222 120 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;