RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA867519", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 10 ✖

tax_clade 1

  • Metamonada · 10 ✖

bioproject 1

  • PRJNA867519 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17426281 17426281 PRJNA867519_P_NODE_20154_length_275_cov_1.396040_g20000_i0 PRJNA867519 20154 275 1.39604 3.83911 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 91.6 5.36e-14   NTclustered gi|2794861965|ref|XM_067913989.1| 135588 g20000 i0 84.848 0.36 99 6 36 3 138 236 319 408 Histomonas meleagridis FHA domain-containing protein (GO595_001215), partial mRNA blastn 99 91.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
18699408 18699408 PRJNA867519_P_NODE_18575_length_282_cov_1.344498_g18421_i0 PRJNA867519 18575 282 1.344498 3.79148436 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 117 9.09e-22   NTclustered gi|2806465789|ref|XM_068506272.1| 1144522 g18421 i0 85.088 8.10283687943262 114 17 40 0 78 191 221 108 Tritrichomonas foetus histone H3.2 (YAH3), partial mRNA blastn 2285 117 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27813522 27813522 PRJNA867519_P_NODE_29864_length_246_cov_0.890173_g29710_i0 PRJNA867519 29864 246 0.890173 2.18982558 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 47.8 6.47e-4   NR XP_068356159.1 1144522 g29710 i0 42 2.41463414634146 81 37 98.8 3 3 245 358 428 XP_068356159.1 uncharacterized protein TRFO_29679 [Tritrichomonas foetus] diamond 594 47.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28129107 28129107 PRJNA867519_P_NODE_10005_length_358_cov_1.487719_g9851_i0 PRJNA867519 10005 358 1.487719 5.32603402 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 72 3.07e-12   NR XP_068361206.1 1144522 g9851 i0 45.3 1.35754189944134 64 35 53.6 0 354 163 87 150 XP_068361206.1 Ubiquitin-conjugating enzyme E2 6 [Tritrichomonas foetus] diamond 486 72 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29076376 29076376 PRJNA867519_P_NODE_12288_length_331_cov_1.104651_g12134_i0 PRJNA867519 12288 331 1.104651 3.65639481 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 61.2 3.37e-8   NR XP_001313004.1 412133 g12134 i0 38.7 1.69486404833837 93 53 83.4 3 5 280 591 680 XP_001313004.1 zinc ion binding [Trichomonas vaginalis G3] diamond 561 61.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29139662 29139662 PRJNA867519_P_NODE_5389_length_465_cov_2.145408_g5235_i0 PRJNA867519 5389 465 2.145408 9.9761472 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 49.7 0.0014   NR XP_068363372.1 1144522 g5235 i0 46.3 0.264516129032258 41 22 26.5 0 464 342 620 660 XP_068363372.1 uncharacterized protein TRFO_20539 [Tritrichomonas foetus] diamond 123 49.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29360460 29360460 PRJNA867519_P_NODE_6169_length_438_cov_1.687671_g6015_i0 PRJNA867519 6169 438 1.687671 7.39199898 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 110 2.48e-25   NR XP_001323344.1 412133 g6015 i0 45.2 0.849315068493151 124 64 84.9 2 10 381 172 291 XP_001323344.1 STKc CK1 domain-containing protein [Trichomonas vaginalis G3] diamond 372 110 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30181462 30181462 PRJNA867519_P_NODE_23872_length_258_cov_1.664865_g23718_i0 PRJNA867519 23872 258 1.664865 4.2953517 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 90.1 2.51e-21   NR XP_067772230.1 135588 g23718 i0 60 0.697674418604651 60 24 69.8 0 2 181 38 97 XP_067772230.1 uncharacterized protein GO595_007667 [Histomonas meleagridis] diamond 180 90.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31856739 31856739 PRJNA867519_P_NODE_3337_length_568_cov_29.266667_g3186_i0 PRJNA867519 3337 568 29.266667 166.23466856 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 199 1.55e-61   NR XP_068360038.1 1144522 g3186 i0 57.2 6.47535211267606 173 74 91.4 0 22 540 5 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 3678 199 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32458135 32458135 PRJNA867519_P_NODE_29979_length_246_cov_0.890173_g29825_i0 PRJNA867519 29979 246 0.890173 2.18982558 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 81.6 6.74e-16   NR XP_068349702.1 1144522 g29825 i0 46.3 2.95121951219512 80 43 97.6 0 6 245 313 392 XP_068349702.1 RAC family serine/threonine-protein kinase like protein [Tritrichomonas foetus] diamond 726 81.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;