RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA867519", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA867519 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26865580 26865580 PRJNA867519_P_NODE_32881_length_242_cov_0.911243_g32727_i0 PRJNA867519 32881 242 0.911243 2.20520806 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 62 4.21e-9   NR NUM52862.1 2030809 g32727 i0 45.5 3.21074380165289 66 36 81.8 0 199 2 7 72 NUM52862.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 777 62 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28728951 28728951 PRJNA867519_P_NODE_18507_length_282_cov_1.473684_g18353_i0 PRJNA867519 18507 282 1.473684 4.15578888 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 45.1 0.0093   NR MFO7975644.1 2030809 g18353 i0 40.4 0.553191489361702 52 23 50 2 168 28 17 65 MFO7975644.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 156 45.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30845106 30845106 PRJNA867519_P_NODE_19534_length_278_cov_1.126829_g19380_i0 PRJNA867519 19534 278 1.126829 3.13258462 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 56.6 6.46e-7   NR MCL4692566.1 2030809 g19380 i0 41.4 3.03237410071942 70 40 75.5 1 66 275 155 223 MCL4692566.1 phosphatidate cytidylyltransferase [Candidatus Hydrogenedentota bacterium] diamond 843 56.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31129029 31129029 PRJNA867519_P_NODE_22155_length_266_cov_1.404145_g22001_i0 PRJNA867519 22155 266 1.404145 3.7350257 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 58.9 9.84e-8   NR MBN2310183.1 2030809 g22001 i0 39.6 2.03007518796993 91 44 97 3 262 5 596 680 MBN2310183.1 PAS domain S-box protein [Candidatus Hydrogenedentota bacterium] diamond 540 58.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;