RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA867519", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA867519 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29928961 29928961 PRJNA867519_P_NODE_20911_length_272_cov_1.160804_g20757_i0 PRJNA867519 20911 272 1.160804 3.15738688 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 99.4 1.1e-22   NR MBN2380720.1 2052148 g20757 i0 54.4 1.74264705882353 79 36 87.1 0 237 1 22 100 MBN2380720.1 NUDIX hydrolase [candidate division WOR-3 bacterium] diamond 474 99.4 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
29968494 29968494 PRJNA867519_P_NODE_15451_length_300_cov_2.035242_g15297_i0 PRJNA867519 15451 300 2.035242 6.105726 Bacteria 2 Bacteria Bacteria 103 9.87e-25   NR MEO0121409.1 2052148 g15297 i0 50 4 100 44 100 2 1 300 116 209 MEO0121409.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [candidate division WOR-3 bacterium] diamond 1200 104 0.990384615384615 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
30118208 30118208 PRJNA867519_P_NODE_24932_length_253_cov_1.283333_g24778_i0 PRJNA867519 24932 253 1.283333 3.24683249 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 54.7 2.66e-6   NR MEO0101292.1 2052148 g24778 i0 38.1 1.99209486166008 84 47 99.6 2 252 1 558 636 MEO0101292.1 tetratricopeptide repeat protein [candidate division WOR-3 bacterium] diamond 504 54.7 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;