RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA864829" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA864829 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16149980 16149980 PRJNA864829_S_NODE_513_length_614_cov_2.454867_g53_i1 PRJNA864829 513 614 2.454867 15.07288338 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 324 1.17e-83   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g53 i1 77.738 175.925081433225 557 104 89 19 26 573 429668 430213 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 108018 324 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
20363244 20363244 PRJNA864829_S_NODE_6356_length_241_cov_2.848958_g6270_i0 PRJNA864829 6356 241 2.848958 6.86598878 Pseudomonadati 3379134 Bacteria Bacteria 294 3.26e-75   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g6270 i0 88.889 80.6224066390042 243 22 100 5 1 241 1602041 1602280 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 19430 294 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30340017 30340017 PRJNA864829_S_NODE_4652_length_272_cov_2.004484_g4566_i0 PRJNA864829 4652 272 2.004484 5.45219648 Pyranulibacter aquaticus 3163344 Bacteria Bacteria 164 1.38e-44   NR MFA3783288.1 3163344 g4566 i0 77.5 5.93382352941176 89 20 98.2 0 1 267 183 271 MFA3783288.1 glycosyl hydrolase [Melioribacteraceae bacterium 4301-Me] diamond 1614 164 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Pyranulibacter Pyranulibacter aquaticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;