contig_metadata
11 rows where bioproject = "PRJNA864829", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1236873 | 1236873 | PRJNA864829_S_NODE_5781_length_250_cov_1.587065_g5695_i0 | PRJNA864829 | 5781 | 250 | 1.587065 | 3.9676625 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 412 | 9.02e-111 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g5695 | i0 | 99.558 | 85.168 | 226 | 1 | 90 | 0 | 25 | 250 | 1646 | 1871 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 21292 | 412 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 5950584 | 5950584 | PRJNA864829_S_NODE_3425_length_302_cov_3.011858_g3339_i0 | PRJNA864829 | 3425 | 302 | 3.011858 | 9.09581116 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 261 | 4.29e-65 | NTclustered | gi|2556916994|gb|CP129486.1| | 3034175 | g3339 | i0 | 82.392 | 292.367549668874 | 301 | 52 | 99 | 1 | 2 | 302 | 468921 | 468622 | MAG: Bdellovibrionota bacterium isolate cMAG.10 chromosome, complete genome | blastn | 88295 | 261 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 9775282 | 9775282 | PRJNA864829_S_NODE_10168_length_198_cov_1.664430_g10082_i0 | PRJNA864829 | 10168 | 198 | 1.66443 | 3.2955714 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 154 | 4.5700000000000005e-33 | NTclustered | gi|2556916994|gb|CP129486.1| | 3034175 | g10082 | i0 | 83.951 | 175.979797979798 | 162 | 24 | 81 | 2 | 17 | 177 | 465446 | 465286 | MAG: Bdellovibrionota bacterium isolate cMAG.10 chromosome, complete genome | blastn | 34844 | 154 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 14875277 | 14875277 | PRJNA864829_S_NODE_1372_length_424_cov_3.090667_g1286_i0 | PRJNA864829 | 1372 | 424 | 3.090667 | 13.10442808 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 172 | 3.01e-38 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g1286 | i0 | 75.385 | 89.0471698113208 | 390 | 79 | 90 | 13 | 45 | 424 | 665608 | 665990 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 37756 | 172 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 17425439 | 17425439 | PRJNA864829_S_NODE_12834_length_179_cov_1.238462_g12748_i0 | PRJNA864829 | 12834 | 179 | 1.238462 | 2.21684698 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 86.1 | 1.5e-12 | NTclustered | gi|2556916994|gb|CP129486.1| | 3034175 | g12748 | i0 | 100 | 1.79329608938547 | 46 | 0 | 26 | 0 | 26 | 71 | 469849 | 469804 | MAG: Bdellovibrionota bacterium isolate cMAG.10 chromosome, complete genome | blastn | 321 | 86.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 27181375 | 27181375 | PRJNA864829_S_NODE_5822_length_249_cov_3.395000_g5736_i0 | PRJNA864829 | 5822 | 249 | 3.395 | 8.45355 | Bdellovibrionales bacterium GWB1_55_8 | 1797386 | Bacteria | Bacteria | 140 | 7.47e-41 | NR | OFZ21052.1 | 1797386 | g5736 | i0 | 85.4 | 2.96385542168675 | 82 | 12 | 98.8 | 0 | 247 | 2 | 40 | 121 | OFZ21052.1 MAG: flagellar basal body rod protein FlgC [Bdellovibrionales bacterium GWB1_55_8] | diamond | 738 | 140 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium GWB1_55_8 | ||||
| 27718955 | 27718955 | PRJNA864829_S_NODE_9564_length_203_cov_1.727273_g9478_i0 | PRJNA864829 | 9564 | 203 | 1.727273 | 3.50636419 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 63.9 | 7.04e-10 | NR | MCM2324033.1 | 2599941 | g9478 | i0 | 78.6 | 0.620689655172414 | 42 | 8 | 62.1 | 1 | 126 | 1 | 9 | 49 | MCM2324033.1 phosphoglycerate kinase [Oligoflexia bacterium] | diamond | 126 | 63.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 27907675 | 27907675 | PRJNA864829_S_NODE_4865_length_267_cov_2.371560_g4779_i0 | PRJNA864829 | 4865 | 267 | 2.37156 | 6.3320652 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 117 | 1.67e-29 | NR | MES2964497.1 | 3034175 | g4779 | i0 | 58.4 | 1 | 89 | 37 | 100 | 0 | 1 | 267 | 188 | 276 | MES2964497.1 c-type cytochrome [Bdellovibrionota bacterium] | diamond | 267 | 117 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 28349966 | 28349966 | PRJNA864829_S_NODE_4366_length_278_cov_1.410480_g4280_i0 | PRJNA864829 | 4366 | 278 | 1.41048 | 3.9211344 | Bdellovibrionales bacterium RIFOXYC1_FULL_54_43 | 1797397 | Bacteria | Bacteria | 69.7 | 7.27e-12 | NR | OFZ53503.1 | 1797397 | g4280 | i0 | 39.8 | 1.05755395683453 | 98 | 48 | 98.2 | 2 | 276 | 4 | 136 | 229 | OFZ53503.1 MAG: hypothetical protein A2428_14120 [Bdellovibrionales bacterium RIFOXYC1_FULL_54_43] | diamond | 294 | 69.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium RIFOXYC1_FULL_54_43 | ||||
| 29738974 | 29738974 | PRJNA864829_S_NODE_2150_length_357_cov_1.616883_g2064_i0 | PRJNA864829 | 2150 | 357 | 1.616883 | 5.77227231 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 177 | 2.91e-52 | NR | MDR3606861.1 | 2599941 | g2064 | i0 | 78 | 1.98319327731092 | 118 | 25 | 99.2 | 1 | 2 | 355 | 146 | 262 | MDR3606861.1 6-phosphofructokinase [Oligoflexia bacterium] | diamond | 708 | 177 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 32363244 | 32363244 | PRJNA864829_S_NODE_13279_length_176_cov_1.677165_g13193_i0 | PRJNA864829 | 13279 | 176 | 1.677165 | 2.9518104 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 101 | 7.16e-24 | NR | MCB0405581.1 | 2053517 | g13193 | i0 | 80.7 | 0.971590909090909 | 57 | 11 | 97.2 | 0 | 2 | 172 | 94 | 150 | MCB0405581.1 ABC transporter permease subunit [Bdellovibrionales bacterium] | diamond | 171 | 101 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;