RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA864829", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA864829 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19088383 19088383 PRJNA864829_S_NODE_3315_length_305_cov_7.515625_g3229_i0 PRJNA864829 3315 305 7.515625 22.92265625 Gastropoda 6448 Mollusca Mollusca 115 3.58e-21   NTclustered gi|340763917|gb|JF509736.1| 176853 g3229 i0 82.09 19.2360655737705 134 24 44 0 8 141 2478 2345 Crepidula fornicata voucher AToL000306 28S ribosomal RNA gene, partial sequence blastn 5867 115 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Calyptraeidae Crepidula Crepidula fornicata
21249453 21249453 PRJNA864829_S_NODE_5777_length_250_cov_1.890547_g5691_i0 PRJNA864829 5777 250 1.890547 4.7263675 Anadara broughtonii 148819 Mollusca Mollusca 56.5 0.002   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g5691 i0 100 0.5 30 0 12 0 221 250 58 29 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 125 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
27055224 27055224 PRJNA864829_S_NODE_2962_length_318_cov_2.368030_g2876_i0 PRJNA864829 2962 318 2.36803 7.5303354 Dreissena polymorpha 45954 Mollusca Mollusca 63.2 5.49e-9   NR KAH3860929.1 45954 g2876 i0 51.7 0.566037735849057 60 26 53.8 1 27 197 275 334 KAH3860929.1 hypothetical protein DPMN_023853 [Dreissena polymorpha] diamond 180 63.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
27149515 27149515 PRJNA864829_S_NODE_7882_length_220_cov_1.883041_g7796_i0 PRJNA864829 7882 220 1.883041 4.1426902 Octopus sinensis 2607531 Mollusca Mollusca 50.4 3.97e-5   NR XP_029635009.1 2607531 g7796 i0 50 4.95 50 25 68.2 0 5 154 74 123 XP_029635009.1 zinc finger BED domain-containing protein 5-like [Octopus sinensis] diamond 1089 50.4 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
30528974 30528974 PRJNA864829_S_NODE_3333_length_305_cov_1.664062_g3247_i0 PRJNA864829 3333 305 1.664062 5.0753891 Candidula unifasciata 100452 Mollusca Mollusca 61.2 5.9e-9   NR CAG5129982.1 100452 g3247 i0 51.7 2.28196721311475 58 28 57 0 304 131 125 182 CAG5129982.1 unnamed protein product [Candidula unifasciata] diamond 696 61.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
31034902 31034902 PRJNA864829_S_NODE_9715_length_201_cov_5.427632_g9629_i0 PRJNA864829 9715 201 5.427632 10.90954032 Mytilus edulis 6550 Mollusca Mollusca 43.9 0.00797   NR CAG2187267.1 6550 g9629 i0 47.7 1.40298507462687 44 22 64.2 1 66 194 192 235 CAG2187267.1 unnamed protein product [Mytilus edulis] diamond 282 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;