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contig_metadata

7 rows where bioproject = "PRJNA864829", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA864829 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8889846 8889846 PRJNA864829_S_NODE_5067_length_262_cov_25.938967_g4981_i0 PRJNA864829 5067 262 25.938967 67.96009354 Alphamyces 1167811 Fungi Fungi 159 1.37e-34   NTclustered gi|2468791078|gb|OQ702937.1| 2011922 g4981 i0 79.498 37.793893129771 239 37 89 9 26 259 2765 2996 Rhizophydiales sp. isolate PSC285 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9902 159 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     Rhizophydiales sp.
12716448 12716448 PRJNA864829_S_NODE_4070_length_284_cov_39.757447_g3984_i0 PRJNA864829 4070 284 39.757447 112.91114948 Rhizophydium 60186 Fungi Fungi 137 7.04e-28   NTclustered gi|1780004527|gb|MN759467.1| 2012212 g3984 i0 89.72 31.3978873239437 107 11 38 0 26 132 7 113 Chytridiomycota sp. isolate OAS2 large subunit ribosomal RNA gene, partial sequence blastn 8917 137 1 Eukaryota Opisthokonta Fungi Chytridiomycota         Chytridiomycota sp.
16149962 16149962 PRJNA864829_S_NODE_2493_length_337_cov_20.284722_g2407_i0 PRJNA864829 2493 337 20.284722 68.35951314 Astrotestudinimyces divisus 3079314 Fungi Fungi 163 1.41e-35   NTclustered gi|2440585864|gb|OQ382927.1| 3079314 g2407 i0 91.525 37.0385756676558 118 10 35 0 191 308 705 588 Neocallimastigales sp. NHY-2023a clone BClone2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12482 163 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes     Astrotestudinimyces Astrotestudinimyces divisus
16539437 16539437 PRJNA864829_S_NODE_6073_length_245_cov_4.571429_g5987_i0 PRJNA864829 6073 245 4.571429 11.20000105 Spizellomycetales 34478 Fungi Fungi 255 1.57e-63   NTclustered gi|1866582793|gb|MT730968.1| 4816 g5987 i0 87.783 90.0489795918367 221 23 90 4 1 220 4770 4553 Spizellomyces acuminatus isolate PLAUS Ad 20 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22062 255 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces acuminatus
17425461 17425461 PRJNA864829_S_NODE_2814_length_323_cov_4.281022_g2728_i0 PRJNA864829 2814 323 4.281022 13.82770106 Polychytrium aggregatum 110093 Fungi Fungi 137 8.14e-28   NTclustered gi|311235598|ref|NG_027613.1| 110093 g2728 i0 92.708 30.3529411764706 96 6 29 1 1 95 2254 2159 Polychytrium aggregatum JEL 109 28S rRNA gene, partial sequence; from reference material blastn 9804 137 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
21249456 21249456 PRJNA864829_S_NODE_6557_length_238_cov_2.455026_g6471_i0 PRJNA864829 6557 238 2.455026 5.84296188 Hyaloraphidium curvatum 82268 Fungi Fungi 129 2.4999999999999997e-36   NR KAI9006966.1 82268 g6471 i0 74.7 3.97058823529412 79 20 99.6 0 237 1 55 133 KAI9006966.1 L30e-like protein [Hyaloraphidium curvatum] diamond 945 129 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30403109 30403109 PRJNA864829_S_NODE_4693_length_271_cov_2.072072_g4607_i0 PRJNA864829 4693 271 2.072072 5.61531512 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 108 1.44e-27   NR KAH9257010.1 1357716 g4607 i0 80.3 0.675276752767528 61 12 67.5 0 270 88 104 164 KAH9257010.1 hypothetical protein BASA81_004831 [Batrachochytrium salamandrivorans] diamond 183 108 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;