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contig_metadata

8 rows where bioproject = "PRJNA864829", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Cyanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 8 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 8 ✖

bioproject 1

  • PRJNA864829 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1236867 1236867 PRJNA864829_S_NODE_14861_length_168_cov_2.655462_g14775_i0 PRJNA864829 14861 168 2.655462 4.46117616 Bacteria 2 Bacteria Bacteria 278 2.14e-70   NTclustered gi|429732865|gb|JX887884.1| 1211 g14775 i0 96.429 101.47619047619 168 6 100 0 1 168 212 45 Uncultured cyanobacterium clone Emix2.2 16S ribosomal RNA gene, 16S-23S ribosomal RNA intergenic spacer, and tRNA-Ile gene, partial sequence blastn 17048 278 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium
1236881 1236881 PRJNA864829_S_NODE_8121_length_217_cov_3.107143_g8035_i0 PRJNA864829 8121 217 3.107143 6.74250031 Bacteria 2 Bacteria Bacteria 385 1.66e-102   NTclustered gi|336109608|gb|JN020217.1| 1211 g8035 i0 98.618 101.981566820276 217 3 100 0 1 217 486 702 Uncultured cyanobacterium clone cher4_2B_90 small subunit ribosomal RNA gene, partial sequence blastn 22130 385 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium
17814318 17814318 PRJNA864829_S_NODE_11514_length_188_cov_0.978417_g11428_i0 PRJNA864829 11514 188 0.978417 1.83942396 Cyanophyceae 3028117 Bacteria Bacteria 56.5 0.001   NTclustered gi|169884305|gb|CP000951.1| 32049 g11428 i0 100 3.98936170212766 30 0 16 0 26 55 1464721 1464750 Synechococcus sp. PCC 7002, complete genome blastn 750 56.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Picosynechococcus Picosynechococcus sp. PCC 7002
21638902 21638902 PRJNA864829_S_NODE_13617_length_174_cov_1.528000_g13531_i0 PRJNA864829 13617 174 1.528 2.65872 Bacteria 2 Bacteria Bacteria 257 2.89e-64   NTclustered gi|429732865|gb|JX887884.1| 1211 g13531 i0 97.351 87.2298850574713 151 4 87 0 24 174 582 732 Uncultured cyanobacterium clone Emix2.2 16S ribosomal RNA gene, 16S-23S ribosomal RNA intergenic spacer, and tRNA-Ile gene, partial sequence blastn 15178 257 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium
26611769 26611769 PRJNA864829_S_NODE_6721_length_236_cov_1.433155_g6635_i0 PRJNA864829 6721 236 1.433155 3.3822458 Coleofasciculaceae cyanobacterium 3081323 Bacteria Bacteria 95.1 2.54e-21   NR HEY9650264.1 3081323 g6635 i0 67.6 2.89830508474576 74 24 94.1 0 222 1 41 114 HEY9650264.1 choice-of-anchor A family protein [Coleofasciculaceae cyanobacterium] diamond 684 95.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Coleofasciculales Coleofasciculaceae   Coleofasciculaceae cyanobacterium
27276477 27276477 PRJNA864829_S_NODE_14443_length_170_cov_1.768595_g14357_i0 PRJNA864829 14443 170 1.768595 3.0066115 Chlorogloea sp. CCALA 695 2107693 Bacteria Bacteria 109 4.11e-26   NR WP_106370030.1 2107693 g14357 i0 98.2 0.988235294117647 56 1 98.8 0 3 170 250 305 WP_106370030.1 efflux RND transporter periplasmic adaptor subunit [Chlorogloea sp. CCALA 695] diamond 168 109 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Entophysalidaceae Chlorogloea Chlorogloea sp. CCALA 695
28129100 28129100 PRJNA864829_S_NODE_11945_length_185_cov_1.558824_g11859_i0 PRJNA864829 11945 185 1.558824 2.8838244 Chlorogloea sp. CCALA 695 2107693 Bacteria Bacteria 62.4 1.99e-9   NR WP_106370030.1 2107693 g11859 i0 100 0.567567567567568 35 0 56.8 0 185 81 189 223 WP_106370030.1 efflux RND transporter periplasmic adaptor subunit [Chlorogloea sp. CCALA 695] diamond 105 62.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Entophysalidaceae Chlorogloea Chlorogloea sp. CCALA 695
28823332 28823332 PRJNA864829_S_NODE_7968_length_219_cov_1.664706_g7882_i0 PRJNA864829 7968 219 1.664706 3.64570614 Nostoc sp. NMS8 2815392 Bacteria Bacteria 63.9 2.91e-10   NR WP_292846863.1 2815392 g7882 i0 64.6 1.31506849315068 48 12 65.8 1 1 144 1 43 WP_292846863.1 WD40 repeat domain-containing protein, partial [Nostoc sp. NMS8] diamond 288 63.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. NMS8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;