RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA864829", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA864829 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11440644 11440644 PRJNA864829_S_NODE_6369_length_241_cov_2.130208_g6283_i0 PRJNA864829 6369 241 2.130208 5.13380128 Bacteria 2 Bacteria Bacteria 77.8 2.35e-16   NR HVO24894.1 2053573 g6283 i0 86.7 1.6804979253112 45 6 56 0 107 241 1 45 HVO24894.1 50S ribosomal protein L22 [Candidatus Margulisiibacteriota bacterium] diamond 405 77.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
27442765 27442765 PRJNA864829_S_NODE_4063_length_285_cov_1.771186_g3977_i0 PRJNA864829 4063 285 1.771186 5.0478801 Bacteria 2 Bacteria Bacteria 57 4.22e-7   NR HVO27643.1 2053573 g3977 i0 48.4 2.02105263157895 64 33 67.4 0 88 279 1 64 HVO27643.1 type II CAAX endopeptidase family protein [Candidatus Margulisiibacteriota bacterium] diamond 576 57 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
28223544 28223544 PRJNA864829_S_NODE_10946_length_192_cov_1.503497_g10860_i0 PRJNA864829 10946 192 1.503497 2.88671424 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 108 2.89e-28   NR HVO26040.1 2053573 g10860 i0 92.2 1 64 5 100 0 1 192 84 147 HVO26040.1 50S ribosomal protein L11 [Candidatus Margulisiibacteriota bacterium] diamond 192 108 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;