RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA864829", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

  • Amoebozoa · 8 ✖

bioproject 1

  • PRJNA864829 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1236885 1236885 PRJNA864829_S_NODE_9561_length_203_cov_1.727273_g9475_i0 PRJNA864829 9561 203 1.727273 3.50636419 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 65.9 2.3e-11   NR KAH3766007.1 1580589 g9475 i0 56.3 1.41871921182266 48 21 70.9 0 3 146 123 170 KAH3766007.1 ubiquitinfusion protein [Pelomyxa schiedti] diamond 288 65.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
7225491 7225491 PRJNA864829_S_NODE_6366_length_241_cov_2.171875_g6280_i0 PRJNA864829 6366 241 2.171875 5.23421875 Coremiostelium polycephalum 142831 Evosea other_Eukaryota 84.2 7.69e-12   NTclustered gi|85062629|gb|DQ340387.1| 142831 g6280 i0 96.078 5.21576763485477 51 2 21 0 34 84 15605 15655 Dictyostelium polycephalum 17S ribosomal RNA, 5.8S ribosomal RNA, and 26S ribosomal RNA genes, complete sequence blastn 1257 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales   Coremiostelium Coremiostelium polycephalum
7225493 7225493 PRJNA864829_S_NODE_6646_length_237_cov_1.468085_g6560_i0 PRJNA864829 6646 237 1.468085 3.47936145 Angulamoeba sp. FN806 1654985 Evosea other_Eukaryota 222 1.53e-53   NTclustered gi|821394117|gb|KP864086.1| 1654985 g6560 i0 85.915 23.2447257383966 213 24 89 6 1 210 804 595 Angulamoeba sp. FN806 small subunit ribosomal RNA gene, partial sequence blastn 5509 222 1 Eukaryota Amoebozoa   Evosea Variosea     Angulamoeba Angulamoeba sp. FN806
13600947 13600947 PRJNA864829_S_NODE_1331_length_429_cov_14.194737_g1245_i0 PRJNA864829 1331 429 14.194737 60.89542173 Ceratiomyxella tahitiensis 661162 Evosea other_Eukaryota 425 2.1199999999999998e-114   NTclustered gi|254679474|gb|FJ544419.1| 661162 g1245 i0 84.828 100.39627039627 435 53 99 12 3 429 587 1016 Ceratiomyxella tahitiensis isolate HI04-93-l-1 18S ribosomal RNA gene, partial sequence blastn 43070 425 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Schizoplasmodiidae Ceratiomyxella Ceratiomyxella tahitiensis
14875296 14875296 PRJNA864829_S_NODE_3792_length_291_cov_3.719008_g3706_i0 PRJNA864829 3792 291 3.719008 10.82231328 Phalansterium filosum 857046 Evosea other_Eukaryota 156 1.9999999999999998e-33   NTclustered gi|300078501|gb|GU001163.1| 857046 g3706 i0 80.275 48.3264604810997 218 34 73 9 55 267 2631 2844 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14063 156 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
18698610 18698610 PRJNA864829_S_NODE_2515_length_337_cov_2.218750_g2429_i0 PRJNA864829 2515 337 2.21875 7.4771875 Dictyostelium purpureum 5786 Evosea other_Eukaryota 69.4 3.16e-7   NTclustered gi|167843288|gb|EU339291.1| 5786 g2429 i0 89.286 0.27893175074184 56 4 17 1 16 71 1063 1116 Dictyostelium purpureum strain WS321 tRNA-Pro gene, complete sequence; ATPase subunit 9 (atp9) gene, complete cds; and large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 94 69.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21249436 21249436 PRJNA864829_S_NODE_2157_length_356_cov_20.198697_g2071_i0 PRJNA864829 2157 356 20.198697 71.90736132 Phalansterium filosum 857046 Evosea other_Eukaryota 132 4.21e-26   NTclustered gi|300078501|gb|GU001163.1| 857046 g2071 i0 95.238 20.0505617977528 84 2 42 2 1 83 2834 2916 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7138 132 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
26897088 26897088 PRJNA864829_S_NODE_9361_length_205_cov_1.134615_g9275_i0 PRJNA864829 9361 205 1.134615 2.32596075 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 89.4 8.37e-19   NR KYQ96874.1 361077 g9275 i0 58.5 1.91707317073171 65 27 95.1 0 203 9 540 604 KYQ96874.1 glycyl-tRNA synthetase [Tieghemostelium lacteum] diamond 393 89.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;