contig_metadata
10 rows where bioproject = "PRJNA861969" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3788418 | 3788418 | PRJNA861969_P_NODE_9063_length_429_cov_1.081461_g8832_i0 | PRJNA861969 | 9063 | 429 | 1.081461 | 4.63946769 | Archangiaceae | 39 | Bacteria | Bacteria | 680 | 0 | NTclustered | gi|2579665545|gb|CP043492.1| | 43 | g8832 | i0 | 98.446 | 211.452214452214 | 386 | 6 | 99 | 0 | 44 | 429 | 452593 | 452978 | Cystobacter fuscus strain Cbf 8 chromosome, complete genome | blastn | 90713 | 680 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 7224815 | 7224815 | PRJNA861969_P_NODE_4186_length_640_cov_1.606702_g3959_i0 | PRJNA861969 | 4186 | 640 | 1.606702 | 10.2828928 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 1149 | 0 | NTclustered | gi|2579665545|gb|CP043492.1| | 43 | g3959 | i0 | 99.062 | 243.2 | 640 | 6 | 100 | 0 | 1 | 640 | 7643749 | 7643110 | Cystobacter fuscus strain Cbf 8 chromosome, complete genome | blastn | 155648 | 1149 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 12325811 | 12325811 | PRJNA861969_P_NODE_4950_length_582_cov_2.298625_g4720_i0 | PRJNA861969 | 4950 | 582 | 2.298625 | 13.3779975 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 1070 | 0 | NTclustered | gi|2579665545|gb|CP043492.1| | 43 | g4720 | i0 | 99.828 | 277.79381443299 | 582 | 1 | 100 | 0 | 1 | 582 | 452320 | 451739 | Cystobacter fuscus strain Cbf 8 chromosome, complete genome | blastn | 161676 | 1070 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 27505834 | 27505834 | PRJNA861969_P_NODE_25343_length_274_cov_1.184080_g25112_i0 | PRJNA861969 | 25343 | 274 | 1.18408 | 3.2443792 | Polyangiaceae | 49 | Bacteria | Bacteria | 84 | 5.71e-17 | NR | MFT3772076.1 | 1971901 | g25112 | i0 | 65.6 | 1.99270072992701 | 61 | 20 | 65.7 | 1 | 270 | 91 | 238 | 298 | MFT3772076.1 ion channel [Minicystis sp.] | diamond | 546 | 84 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis sp. | |||
| 27655569 | 27655569 | PRJNA861969_P_NODE_11124_length_389_cov_1.161392_g10893_i0 | PRJNA861969 | 11124 | 389 | 1.161392 | 4.51781488 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 45.8 | 0.0129 | NR | MCK6575926.1 | 2818507 | g10893 | i0 | 48.1 | 0.416452442159383 | 54 | 27 | 40.9 | 1 | 165 | 7 | 8 | 61 | MCK6575926.1 serine/threonine protein kinase [Myxococcota bacterium] | diamond | 162 | 45.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 27781777 | 27781777 | PRJNA861969_P_NODE_37304_length_245_cov_0.895349_g37073_i0 | PRJNA861969 | 37304 | 245 | 0.895349 | 2.19360505 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 136 | 2.39e-35 | NR | MDB5219357.1 | 2484252 | g37073 | i0 | 87.7 | 0.991836734693878 | 81 | 10 | 99.2 | 0 | 243 | 1 | 76 | 156 | MDB5219357.1 Lipid export ATP-binding/permease protein MsbA [Myxococcaceae bacterium] | diamond | 243 | 136 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 27844619 | 27844619 | PRJNA861969_P_NODE_24784_length_276_cov_2.113300_g24553_i0 | PRJNA861969 | 24784 | 276 | 2.1133 | 5.832708 | Archangium primigenium | 2792470 | Bacteria | Bacteria | 108 | 1.0400000000000002e-27 | NR | WP_204486456.1 | 2792470 | g24553 | i0 | 98.2 | 0.608695652173913 | 56 | 1 | 60.9 | 0 | 109 | 276 | 1 | 56 | WP_204486456.1 GNAT family N-acetyltransferase [Archangium primigenium] | diamond | 168 | 108 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Melittangium | [Archangium] primigenium | ||
| 29968489 | 29968489 | PRJNA861969_P_NODE_26791_length_267_cov_1.587629_g26560_i0 | PRJNA861969 | 26791 | 267 | 1.587629 | 4.23896943 | Myxococcia | 32015 | Bacteria | Bacteria | 73.9 | 1.84e-13 | NR | MCA9587853.1 | 2026763 | g26560 | i0 | 51.1 | 1.98876404494382 | 92 | 42 | 100 | 1 | 1 | 267 | 148 | 239 | MCA9587853.1 GNAT family N-acetyltransferase [Myxococcales bacterium] | diamond | 531 | 73.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31287292 | 31287292 | PRJNA861969_P_NODE_22435_length_287_cov_1.439252_g22204_i0 | PRJNA861969 | 22435 | 287 | 1.439252 | 4.13065324 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 111 | 1.57e-26 | NR | MBK6921356.1 | 2026735 | g22204 | i0 | 59.8 | 0.857142857142857 | 82 | 32 | 84.7 | 1 | 2 | 244 | 262 | 343 | MBK6921356.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 246 | 111 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32268268 | 32268268 | PRJNA861969_P_NODE_41958_length_241_cov_0.916667_g41727_i0 | PRJNA861969 | 41958 | 241 | 0.916667 | 2.20916747 | Archangium gephyra | 48 | Bacteria | Bacteria | 134 | 1e-37 | NR | PZR04419.1 | 48 | g41727 | i0 | 91.8 | 0.908713692946058 | 73 | 6 | 90.9 | 0 | 3 | 221 | 120 | 192 | PZR04419.1 MAG: hypothetical protein DI536_34240 [Archangium gephyra] | diamond | 219 | 134 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;