RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA861969" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA861969 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7614531 7614531 PRJNA861969_P_NODE_37126_length_245_cov_0.895349_g36895_i0 PRJNA861969 37126 245 0.895349 2.19360505 Mesomycoplasma 2923352 Bacteria Bacteria 451 1.87e-122   NTclustered gi|1720621726|gb|CP035041.1| 2100 g36895 i0 100 14.9551020408163 244 0 99 0 2 245 643673 643430 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3664 451 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
13990365 13990365 PRJNA861969_P_NODE_38311_length_244_cov_0.900585_g38080_i0 PRJNA861969 38311 244 0.900585 2.1974274 Mesomycoplasma 2923352 Bacteria Bacteria 451 1.86e-122   NTclustered gi|1720621726|gb|CP035041.1| 2100 g38080 i0 100 15.6639344262295 244 0 100 0 1 244 360171 359928 Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome blastn 3822 451 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;