RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA861969" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA861969 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4675077 4675077 PRJNA861969_P_NODE_41124_length_241_cov_1.833333_g40893_i0 PRJNA861969 41124 241 1.833333 4.41833253 Octopus bimaculoides 37653 Mollusca Mollusca 137 5.82e-28   NTclustered gi|2427250420|ref|XR_008264569.1| 37653 g40893 i0 90.476 0.435684647302905 105 8 44 1 135 239 477 375 PREDICTED: Octopus bimaculoides uncharacterized LOC128248331 (LOC128248331), ncRNA blastn 105 137 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
11050287 11050287 PRJNA861969_P_NODE_40489_length_242_cov_0.911243_g40258_i0 PRJNA861969 40489 242 0.911243 2.20520806 Octopus bimaculoides 37653 Mollusca Mollusca 180 9.58e-41   NTclustered gi|2427301565|ref|XM_052978171.1| 37653 g40258 i0 87.578 73.5702479338843 161 13 64 2 1 154 3006 3166 PREDICTED: Octopus bimaculoides gamma-aminobutyric acid receptor alpha-like (LOC106883576), transcript variant X1, mRNA blastn 17804 180 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
17424395 17424395 PRJNA861969_P_NODE_22694_length_286_cov_1.441315_g22463_i0 PRJNA861969 22694 286 1.441315 4.1221609 Octopus sinensis 2607531 Mollusca Mollusca 165 3.25e-36   NTclustered gi|1914620485|ref|XR_005001674.1| 2607531 g22463 i0 85.987 6.49300699300699 157 18 55 4 61 216 12 165 PREDICTED: Octopus sinensis uncharacterized LOC118765793 (LOC118765793), ncRNA blastn 1857 165 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
25072756 25072756 PRJNA861969_P_NODE_460_length_2318_cov_33.125167_g376_i0 PRJNA861969 460 2318 33.125167 767.84137106 Metazoa 33208 Mollusca Mollusca 725 2.0599999999999996e-252   NR XP_013082114.1 6526 g376 i0 62.6 182.843399482312 594 204 74.7 2 20 1750 7 599 XP_013082114.1 heat shock 70 kDa protein cognate 4 [Biomphalaria glabrata] diamond 423831 731 0.991792065663475 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;