RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA861969", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA861969 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11050372 11050372 PRJNA861969_P_NODE_749_length_1672_cov_13.652283_g634_i0 PRJNA861969 749 1672 13.652283 228.26617176 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 54.7 0.048   NTclustered gi|1191051559|ref|XM_021047964.1| 2652724 g634 i0 100 0.0173444976076555 29 0 2 0 1371 1399 3818 3846 PREDICTED: Exaiptasia diaphana monocarboxylate transporter 10 (LOC110242031), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
19973194 19973194 PRJNA861969_P_NODE_40476_length_242_cov_0.911243_g40245_i0 PRJNA861969 40476 242 0.911243 2.20520806 Gorgonia ventalina 204384 Cnidaria other_Eukaryota 91.6 4.62e-14   NTclustered gi|211910001|gb|FJ390052.1| 204384 g40245 i0 83.168 0.417355371900826 101 16 42 1 79 179 100 1 Gorgonia ventalina microsatellite SYM203 sequence blastn 101 91.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Gorgoniidae Gorgonia Gorgonia ventalina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;