RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA859990", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA859990 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25462779 25462779 PRJNA859990_S_NODE_19560_length_247_cov_0.862069_g19299_i0 PRJNA859990 19560 247 0.862069 2.12931043 Alphainfluenzavirus 197911 Viruses Viruses 340 4.25e-89   NTclustered gi|1377652890|gb|MH209352.1| 11320 g19299 i0 100 74.4858299595142 184 0 74 0 64 247 1261 1078 Influenza A virus (A/chicken/Guangxi/SD098/2017(H7N9)) segment 1 polymerase PB2 (PB2) gene, complete cds blastn 18398 340 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
27971039 27971039 PRJNA859990_S_NODE_1505_length_722_cov_3.198767_g1267_i0 PRJNA859990 1505 722 3.198767 23.09509774 African cichlid piscichuvirus 3065075 Viruses Viruses 124 1.8899999999999999e-28   NR WLN26256.1 3065075 g1267 i0 45.3 0.569252077562327 137 75 56.9 0 697 287 98 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 411 124 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
28326407 28326407 PRJNA859990_S_NODE_13266_length_285_cov_1.160377_g13005_i0 PRJNA859990 13266 285 1.160377 3.30707445 Chuvivirus 2842604 Viruses Viruses 111 2.69e-26   NR UVF58769.1 2842604 g13005 i0 60 2.86315789473684 90 36 94.7 0 275 6 280 369 UVF58769.1 MAG: S protein [Salarius guttatus piscichuvirus] diamond 816 112 0.991071428571429 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;