RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA859990" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA859990 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5949196 5949196 PRJNA859990_S_NODE_18105_length_250_cov_1.508475_g17844_i0 PRJNA859990 18105 250 1.508475 3.7711875 Chytridiomycota 4761 Fungi Fungi 124 4.81e-34   NR KAI9023280.1 82268 g17844 i0 77.8 13.68 81 18 97.2 0 243 1 19 99 KAI9023280.1 60S ribosomal protein L12 [Hyaloraphidium curvatum] diamond 3420 124 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
16148632 16148632 PRJNA859990_S_NODE_21533_length_242_cov_1.366864_g21272_i0 PRJNA859990 21533 242 1.366864 3.30781088 Harpochytrium sp. JEL105 224131 Fungi Fungi 56.5 0.002   NTclustered gi|29126629|ref|NC_004623.1| 224131 g21272 i0 94.595 0.152892561983471 37 0 15 1 143 179 19565 19599 Harpochytrium sp. JEL105 mitochondrion, complete genome blastn 37 56.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Harpochytriaceae Harpochytrium Harpochytrium sp. JEL105

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;