RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA859990", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 6 ✖

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA859990 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12325003 12325003 PRJNA859990_S_NODE_11610_length_301_cov_1.350877_g11349_i0 PRJNA859990 11610 301 1.350877 4.06613977 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 496 1.08e-135   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g11349 i0 96.346 1 301 11 100 0 1 301 6691 6391 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 301 496 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
14873986 14873986 PRJNA859990_S_NODE_7672_length_360_cov_1.968641_g7411_i0 PRJNA859990 7672 360 1.968641 7.0871076 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 627 4.459999999999999e-175   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g7411 i0 98.061 1.00277777777778 361 6 100 1 1 360 5437 5797 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 361 627 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16148713 16148713 PRJNA859990_S_NODE_6473_length_389_cov_1.515823_g6212_i0 PRJNA859990 6473 389 1.515823 5.89655147 Grifola frondosa partitivirus 1 2421281 Viruses Viruses 708 0   NTclustered gi|1594452116|dbj|LC425601.1| 2421281 g6212 i0 99.486 1 389 2 100 0 1 389 1582 1970 Grifola frondosa partitivirus 1 M51 genomic RNA, segment RNA1, complete genome blastn 389 708 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Grifola frondosa partitivirus 1
17423975 17423975 PRJNA859990_S_NODE_14_length_7209_cov_27.053391_g1_i0 PRJNA859990 14 7209 27.053391 1950.27895719 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2477 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1 i0 91.755 0.651824108752948 1783 142 65 5 5426 7205 5329 7109 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4699 2477 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
25072058 25072058 PRJNA859990_S_NODE_21840_length_242_cov_0.869822_g21579_i0 PRJNA859990 21840 242 0.869822 2.10496924 Betapartitivirus pleuroti 3427255 Viruses Viruses 424 4.01e-114   NTclustered gi|260516646|gb|GQ505290.1| 674983 g21579 i0 98.34 4.93801652892562 241 4 99 0 2 242 3554 3314 Pleurotus ostreatus virus 1 RNA-dependent RNA polymerase gene, partial cds blastn 1195 424 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Betapartitivirus Betapartitivirus pleuroti
26960018 26960018 PRJNA859990_S_NODE_9062_length_335_cov_1.270992_g8801_i0 PRJNA859990 9062 335 1.270992 4.2578232 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 110 1.4199999999999999e-25   NR AVM87439.1 3063761 g8801 i0 56.7 0.805970149253731 90 39 80.6 0 277 8 1065 1154 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 270 110 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;