RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA859990", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA859990 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17423970 17423970 PRJNA859990_S_NODE_14614_length_273_cov_1.305000_g14353_i0 PRJNA859990 14614 273 1.305 3.56265 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 272 1.77e-68   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g14353 i0 93.011 192.754578754579 186 13 86 0 36 221 317055 317240 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 52622 272 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
21247929 21247929 PRJNA859990_S_NODE_12077_length_296_cov_1.784753_g11816_i0 PRJNA859990 12077 296 1.784753 5.28286888 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 364 3.109999999999999e-96   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g11816 i0 88.889 106.868243243243 297 32 100 1 1 296 316062 316358 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 31633 364 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
30528952 30528952 PRJNA859990_S_NODE_18293_length_250_cov_0.870056_g18032_i0 PRJNA859990 18293 250 0.870056 2.17514 Armatimonadota bacterium 2033014 Bacteria Bacteria 47.4 2.43e-4   NR HTE18447.1 2033014 g18032 i0 88.5 0.312 26 3 31.2 0 171 248 1 26 HTE18447.1 hypothetical protein [Armatimonadota bacterium] diamond 78 47.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;