RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA859990", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA859990 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8498748 8498748 PRJNA859990_S_NODE_147_length_1780_cov_40.496192_g39_i4 PRJNA859990 147 1780 40.496192 720.8322176 Hirudo verbana 311461 Annelida Annelida 56.5 0.014   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g39 i4 94.595 0.0207865168539326 37 0 2 2 1155 1189 13278364 13278400 Hirudo verbana genome assembly, chromosome: 1 blastn 37 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
14873897 14873897 PRJNA859990_S_NODE_21632_length_242_cov_1.005917_g21371_i0 PRJNA859990 21632 242 1.005917 2.43431914 Ailoscolex lacteospumosus 1046305 Annelida Annelida 60.2 1.3e-4   NTclustered gi|2920003418|emb|OZ238863.1| 1046305 g21371 i0 94.737 1.40495867768595 38 2 16 0 28 65 8648519 8648482 Ailoscolex lacteospumosus genome assembly, chromosome: 4 blastn 340 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
27181358 27181358 PRJNA859990_S_NODE_19522_length_247_cov_0.879310_g19261_i0 PRJNA859990 19522 247 0.87931 2.1718957 Paralvinella palmiformis 53620 Annelida Annelida 65.5 3.85e-10   NR KAK2161163.1 53620 g19261 i0 76.3 1.83400809716599 38 9 46.2 0 134 247 134 171 KAK2161163.1 hypothetical protein LSH36_120g02008 [Paralvinella palmiformis] diamond 453 65.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;