RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA859990", tax_clade = "Candidatus Thermofonsia Clade 3" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 6 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 6 ✖

bioproject 1

  • PRJNA859990 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2121285 2121285 PRJNA859990_S_NODE_17422_length_253_cov_1.122222_g17161_i0 PRJNA859990 17422 253 1.122222 2.83922166 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 337 5.659999999999998e-88   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g17161 i0 90.837 176.146245059289 251 23 99 0 1 251 3495588 3495338 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 44565 337 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
8498760 8498760 PRJNA859990_S_NODE_16067_length_261_cov_2.090426_g15806_i0 PRJNA859990 16067 261 2.090426 5.45601186 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 342 1.26e-89   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g15806 i0 90.421 28.6819923371648 261 24 100 1 1 261 3496191 3495932 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 7486 342 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
11049518 11049518 PRJNA859990_S_NODE_17769_length_251_cov_1.370787_g17508_i0 PRJNA859990 17769 251 1.370787 3.44067537 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 387 5.489999999999998e-103   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g17508 i0 94.422 132.701195219124 251 14 100 0 1 251 3497381 3497131 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 33308 387 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
13599486 13599486 PRJNA859990_S_NODE_10331_length_316_cov_1.790123_g10070_i0 PRJNA859990 10331 316 1.790123 5.65678868 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 388 1.99e-103   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g10070 i0 89.137 87.3955696202532 313 32 98 2 6 316 3494926 3494614 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 27617 388 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
17424163 17424163 PRJNA859990_S_NODE_9274_length_332_cov_1.081081_g9013_i0 PRJNA859990 9274 332 1.081081 3.58918892 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 470 7.289999999999999e-128   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g9013 i0 92.401 83.1987951807229 329 25 99 0 4 332 3495856 3495528 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 27622 470 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
22522754 22522754 PRJNA859990_S_NODE_7678_length_360_cov_1.735192_g7417_i0 PRJNA859990 7678 360 1.735192 6.2466912 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 438 2.24e-118   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g7417 i0 88.643 131.405555555556 361 40 100 1 1 360 3494958 3494598 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 47306 438 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;