RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA857857", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA857857 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12324720 12324720 PRJNA857857_P_NODE_790_length_1474_cov_20.765882_g618_i0 PRJNA857857 790 1474 20.765882 306.08910068 Emaravirus pyri 2845775 Viruses Viruses 1502 0   NTclustered gi|1867190380|gb|MN873587.2| 2603627 g618 i0 98.7 44.1567164179104 846 11 57 0 374 1219 1 846 Pear chlorotic leaf spot-associated virus isolate PCLSaV/HB P5 protein gene, complete cds blastn 65087 1502 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Fimoviridae Emaravirus Emaravirus pyri
30244792 30244792 PRJNA857857_P_NODE_17052_length_380_cov_1.742671_g16605_i0 PRJNA857857 17052 380 1.742671 6.6221498 African cichlid piscichuvirus 3065075 Viruses Viruses 84 6.95e-16   NR WLN26256.1 3065075 g16605 i0 55.1 0.615789473684211 78 35 61.6 0 147 380 229 306 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 234 84 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;