contig_metadata
11 rows where bioproject = "PRJNA857857" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4673534 | 4673534 | PRJNA857857_P_NODE_34464_length_260_cov_1.235294_g34015_i0 | PRJNA857857 | 34464 | 260 | 1.235294 | 3.2117644 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 361 | 3.469999999999999e-95 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g34015 | i0 | 91.892 | 224.926923076923 | 259 | 20 | 99 | 1 | 1 | 259 | 1903876 | 1904133 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 58481 | 361 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 7222985 | 7222985 | PRJNA857857_P_NODE_20506_length_345_cov_3.014706_g20057_i0 | PRJNA857857 | 20506 | 345 | 3.014706 | 10.4007357 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 359 | 1.72e-94 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g20057 | i0 | 91.353 | 386.211594202899 | 266 | 17 | 76 | 6 | 8 | 270 | 1904745 | 1904483 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 133243 | 359 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 24187338 | 24187338 | PRJNA857857_P_NODE_43179_length_247_cov_0.885057_g42730_i0 | PRJNA857857 | 43179 | 247 | 0.885057 | 2.18609079 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 156 | 5.71e-43 | NR | HKC47731.1 | 2448054 | g42730 | i0 | 97.6 | 4.95546558704453 | 82 | 2 | 99.6 | 0 | 1 | 246 | 432 | 513 | HKC47731.1 iron ABC transporter permease [Gemmatimonadales bacterium] | diamond | 1224 | 156 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 26897058 | 26897058 | PRJNA857857_P_NODE_49201_length_243_cov_0.905882_g48752_i0 | PRJNA857857 | 49201 | 243 | 0.905882 | 2.20129326 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 87.8 | 5.89e-21 | NR | HYR32143.1 | 2448054 | g48752 | i0 | 97.5 | 0.493827160493827 | 40 | 1 | 49.4 | 0 | 124 | 243 | 1 | 40 | HYR32143.1 hypothetical protein [Gemmatimonadales bacterium] | diamond | 120 | 87.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 26991587 | 26991587 | PRJNA857857_P_NODE_28722_length_288_cov_1.744186_g28273_i0 | PRJNA857857 | 28722 | 288 | 1.744186 | 5.02325568 | Gemmatimonadetes bacterium SCN 7 | 1660163 | Bacteria | Bacteria | 44.7 | 0.0126 | NR | ODT02342.1 | 1660163 | g28273 | i0 | 35.1 | 0.802083333333333 | 77 | 46 | 77.1 | 3 | 47 | 268 | 41 | 116 | ODT02342.1 MAG: hypothetical protein ABS52_14075 [Gemmatimonadetes bacterium SCN 70-22] | diamond | 231 | 44.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium SCN 70-22 | |||||
| 28507887 | 28507887 | PRJNA857857_P_NODE_21267_length_339_cov_1.447368_g20818_i0 | PRJNA857857 | 21267 | 339 | 1.447368 | 4.90657752 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 113 | 3.33e-27 | NR | HWA58712.1 | 2448054 | g20818 | i0 | 49.1 | 19.1769911504425 | 114 | 53 | 99.1 | 2 | 4 | 339 | 183 | 293 | HWA58712.1 4-hydroxyphenylpyruvate dioxygenase [Gemmatimonadales bacterium] | diamond | 6501 | 113 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29052893 | 29052893 | PRJNA857857_P_NODE_48168_length_243_cov_0.905882_g47719_i0 | PRJNA857857 | 48168 | 243 | 0.905882 | 2.20129326 | FCB group | 1783270 | Bacteria | Bacteria | 116 | 3.85e-29 | NR | HEX3273210.1 | 2448054 | g47719 | i0 | 93.5 | 1.53086419753086 | 62 | 4 | 76.5 | 0 | 242 | 57 | 221 | 282 | HEX3273210.1 ferritin-like domain-containing protein [Gemmatimonadales bacterium] | diamond | 372 | 116 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29273588 | 29273588 | PRJNA857857_P_NODE_13669_length_426_cov_1.320113_g13223_i0 | PRJNA857857 | 13669 | 426 | 1.320113 | 5.62368138 | Bacteria | 2 | Bacteria | Bacteria | 58.5 | 6.15e-7 | NR | MEO7520644.1 | 1962908 | g13223 | i0 | 35.9 | 1.23943661971831 | 92 | 54 | 62 | 2 | 162 | 425 | 14 | 104 | MEO7520644.1 terminase family protein [Gemmatimonas sp.] | diamond | 528 | 58.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. | |
| 31572230 | 31572230 | PRJNA857857_P_NODE_27096_length_298_cov_1.026667_g26647_i0 | PRJNA857857 | 27096 | 298 | 1.026667 | 3.05946766 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 51.6 | 5.45e-5 | NR | MCJ7630193.1 | 2910168 | g26647 | i0 | 29.6 | 1.6006711409396 | 81 | 57 | 81.5 | 0 | 295 | 53 | 77 | 157 | MCJ7630193.1 PAS domain S-box protein [Longimicrobiales bacterium] | diamond | 477 | 51.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 32521483 | 32521483 | PRJNA857857_P_NODE_33759_length_263_cov_1.621053_g33310_i0 | PRJNA857857 | 33759 | 263 | 1.621053 | 4.26336939 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 53.5 | 7e-6 | NR | MEJ2202921.1 | 2026742 | g33310 | i0 | 39.1 | 0.992395437262357 | 87 | 45 | 99.2 | 2 | 3 | 263 | 21 | 99 | MEJ2202921.1 PD-(D/E)XK nuclease family protein [Gemmatimonadota bacterium] | diamond | 261 | 53.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32773194 | 32773194 | PRJNA857857_P_NODE_39860_length_249_cov_0.875000_g39411_i0 | PRJNA857857 | 39860 | 249 | 0.875 | 2.17875 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 47 | 0.00107 | NR | MXY96196.1 | 2026742 | g39411 | i0 | 34.1 | 1.73493975903614 | 85 | 49 | 96.4 | 3 | 248 | 9 | 163 | 245 | MXY96196.1 class I SAM-dependent methyltransferase [Gemmatimonadota bacterium] | diamond | 432 | 47 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;