RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA857857" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA857857 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3396148 3396148 PRJNA857857_P_NODE_51563_length_241_cov_0.916667_g51114_i0 PRJNA857857 51563 241 0.916667 2.20916747 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 149 4.86e-41   NR HZN50307.1 2072417 g51114 i0 97.5 0.995850622406639 80 2 99.6 0 240 1 268 347 HZN50307.1 efflux RND transporter periplasmic adaptor subunit [Candidatus Methylomirabilota bacterium] diamond 240 149 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
16147939 16147939 PRJNA857857_P_NODE_41993_length_248_cov_0.880000_g41544_i0 PRJNA857857 41993 248 0.88 2.1824 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 158 1.7399999999999999e-43   NR HEY3097669.1 2072417 g41544 i0 93.9 0.991935483870968 82 5 99.2 0 3 248 481 562 HEY3097669.1 molybdopterin cofactor-binding domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 246 158 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
17423404 17423404 PRJNA857857_P_NODE_42514_length_247_cov_0.885057_g42065_i0 PRJNA857857 42514 247 0.885057 2.18609079 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 145 5.22e-41   NR HZN50447.1 2072417 g42065 i0 95.1 0.983805668016194 81 4 98.4 0 245 3 79 159 HZN50447.1 5'-3' exonuclease H3TH domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 243 145 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
19971886 19971886 PRJNA857857_P_NODE_45336_length_245_cov_0.895349_g44887_i0 PRJNA857857 45336 245 0.895349 2.19360505 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 134 2.52e-36   NR HZS34517.1 2072417 g44887 i0 98.4 8.21632653061224 61 1 74.7 0 3 185 241 301 HZS34517.1 ABC transporter permease [Candidatus Methylomirabilota bacterium] diamond 2013 134 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;