RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA857857" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857857 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29013326 29013326 PRJNA857857_P_NODE_39268_length_249_cov_1.312500_g38819_i0 PRJNA857857 39268 249 1.3125 3.268125 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 137 6.69e-38   NR MCH7959965.1 2030809 g38819 i0 76.3 3.86746987951807 80 19 96.4 0 242 3 56 135 MCH7959965.1 SDR family oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 963 137 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29076323 29076323 PRJNA857857_P_NODE_27368_length_296_cov_1.520179_g26919_i0 PRJNA857857 27368 296 1.520179 4.49972984 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 110 7.890000000000001e-26   NR HOJ34253.1 2030809 g26919 i0 53.6 0.983108108108108 97 44 98.3 1 4 294 403 498 HOJ34253.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 291 110 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30339980 30339980 PRJNA857857_P_NODE_26952_length_299_cov_0.933628_g26503_i0 PRJNA857857 26952 299 0.933628 2.79154772 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 48.1 9.14e-4   NR HOJ34253.1 2030809 g26503 i0 27.1 1.7859531772575299 85 62 85.3 0 21 275 587 671 HOJ34253.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 534 48.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;