RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA857857", tax_phylum = "Candidatus Dormiibacterota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA857857 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26991594 26991594 PRJNA857857_P_NODE_42002_length_248_cov_0.880000_g41553_i0 PRJNA857857 42002 248 0.88 2.1824 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 140 9.419999999999999e-39   NR MDQ6878726.1 2052315 g41553 i0 86.6 0.991935483870968 82 11 99.2 0 1 246 110 191 MDQ6878726.1 DUF4349 domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 246 140 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27149478 27149478 PRJNA857857_P_NODE_39902_length_249_cov_0.875000_g39453_i0 PRJNA857857 39902 249 0.875 2.17875 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 119 4.97e-30   NR HEV2013431.1 2052315 g39453 i0 68.7 1 83 26 100 0 249 1 29 111 HEV2013431.1 M24 family metallopeptidase [Candidatus Dormiibacterota bacterium] diamond 249 119 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27655552 27655552 PRJNA857857_P_NODE_26564_length_301_cov_1.206140_g26115_i0 PRJNA857857 26564 301 1.20614 3.6304814 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 146 1.96e-40   NR HXN21501.1 2052315 g26115 i0 63.6 2.95016611295681 99 36 98.7 0 298 2 102 200 HXN21501.1 alginate lyase family protein [Candidatus Dormiibacterota bacterium] diamond 888 146 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;