contig_metadata
11 rows where bioproject = "PRJNA857857", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 845444 | 845444 | PRJNA857857_P_NODE_51341_length_241_cov_0.916667_g50892_i0 | PRJNA857857 | 51341 | 241 | 0.916667 | 2.20916747 | Treponema sp. | 166 | Bacteria | Bacteria | 131 | 2.5599999999999996e-35 | NR | MDR3146432.1 | 166 | g50892 | i0 | 83.1 | 2.87551867219917 | 77 | 13 | 95.9 | 0 | 2 | 232 | 165 | 241 | MDR3146432.1 ABC transporter permease subunit [Treponema sp.] | diamond | 693 | 131 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27276448 | 27276448 | PRJNA857857_P_NODE_51063_length_241_cov_0.916667_g50614_i0 | PRJNA857857 | 51063 | 241 | 0.916667 | 2.20916747 | Candidatus Aphodenecus pullistercoris | 2840669 | Bacteria | Bacteria | 61.6 | 9.47e-10 | NR | MBO8442475.1 | 2840669 | g50614 | i0 | 70 | 0.49792531120332 | 40 | 12 | 49.8 | 0 | 3 | 122 | 104 | 143 | MBO8442475.1 50S ribosomal protein L15 [Candidatus Aphodenecus pullistercoris] | diamond | 120 | 61.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Candidatus Aphodenecus | Candidatus Aphodenecus pullistercoris | |||
| 27632003 | 27632003 | PRJNA857857_P_NODE_36244_length_252_cov_1.290503_g35795_i0 | PRJNA857857 | 36244 | 252 | 1.290503 | 3.25206756 | Bacteria | 2 | Bacteria | Bacteria | 88.2 | 4.18e-18 | NR | MBQ8777714.1 | 166 | g35795 | i0 | 54.9 | 20.202380952381 | 82 | 35 | 97.6 | 1 | 3 | 248 | 365 | 444 | MBQ8777714.1 AAA family ATPase [Treponema sp.] | diamond | 5091 | 88.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27750295 | 27750295 | PRJNA857857_P_NODE_13044_length_436_cov_1.696970_g12599_i0 | PRJNA857857 | 13044 | 436 | 1.69697 | 7.3987892 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 110 | 6.83e-26 | NR | HQI18668.1 | 2026757 | g12599 | i0 | 53.4 | 0.708715596330275 | 103 | 41 | 66.1 | 2 | 55 | 342 | 36 | 138 | HQI18668.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 309 | 110 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 28034384 | 28034384 | PRJNA857857_P_NODE_9345_length_511_cov_1.481735_g8908_i0 | PRJNA857857 | 9345 | 511 | 1.481735 | 7.57166585 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 120 | 4.86e-29 | NR | MBL0265350.1 | 2026757 | g8908 | i0 | 37.4 | 2.01369863013699 | 174 | 99 | 96.9 | 4 | 510 | 16 | 195 | 367 | MBL0265350.1 alpha/beta hydrolase [Leptospiraceae bacterium] | diamond | 1029 | 120 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 29715516 | 29715516 | PRJNA857857_P_NODE_48210_length_243_cov_0.905882_g47761_i0 | PRJNA857857 | 48210 | 243 | 0.905882 | 2.20129326 | Spirochaetales | 136 | Bacteria | Bacteria | 115 | 7.38e-30 | NR | WP_319756817.1 | 886478 | g47761 | i0 | 63.8 | 6.88888888888889 | 80 | 29 | 98.8 | 0 | 3 | 242 | 152 | 231 | WP_319756817.1 copper homeostasis protein CutC [uncultured Sphaerochaeta sp.] | diamond | 1674 | 115 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | uncultured Sphaerochaeta sp. | ||
| 30276581 | 30276581 | PRJNA857857_P_NODE_30072_length_282_cov_0.937799_g29623_i0 | PRJNA857857 | 30072 | 282 | 0.937799 | 2.64459318 | Leptospira wolffii | 409998 | Bacteria | Bacteria | 62.4 | 4.21e-9 | NR | WP_016546670.1 | 409998 | g29623 | i0 | 43.8 | 0.776595744680851 | 73 | 34 | 75.5 | 4 | 270 | 58 | 47 | 114 | WP_016546670.1 acetoacetate decarboxylase family protein [Leptospira wolffii] | diamond | 219 | 62.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira wolffii | ||
| 31066387 | 31066387 | PRJNA857857_P_NODE_23195_length_324_cov_1.920319_g22746_i0 | PRJNA857857 | 23195 | 324 | 1.920319 | 6.22183356 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 56.6 | 1.03e-6 | NR | MBN1834663.1 | 2026792 | g22746 | i0 | 28.3 | 0.981481481481482 | 106 | 68 | 98.1 | 2 | 3 | 320 | 182 | 279 | MBN1834663.1 hypothetical protein [Spirochaetales bacterium] | diamond | 318 | 56.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 31295518 | 31295518 | PRJNA857857_P_NODE_21655_length_336_cov_1.171103_g21206_i0 | PRJNA857857 | 21655 | 336 | 1.171103 | 3.93490608 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 144 | 3.43e-38 | NR | MBN2534482.1 | 2026792 | g21206 | i0 | 63.4 | 3 | 112 | 41 | 100 | 0 | 336 | 1 | 161 | 272 | MBN2534482.1 nicotinate phosphoribosyltransferase [Spirochaetales bacterium] | diamond | 1008 | 145 | 0.993103448275862 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 31382404 | 31382404 | PRJNA857857_P_NODE_42796_length_247_cov_0.885057_g42347_i0 | PRJNA857857 | 42796 | 247 | 0.885057 | 2.18609079 | Candidatus Aphodenecus pullistercoris | 2840669 | Bacteria | Bacteria | 173 | 5.89e-52 | NR | MBO8442769.1 | 2840669 | g42347 | i0 | 100 | 0.995951417004049 | 82 | 0 | 99.6 | 0 | 2 | 247 | 81 | 162 | MBO8442769.1 hypothetical protein [Candidatus Aphodenecus pullistercoris] | diamond | 246 | 173 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Candidatus Aphodenecus | Candidatus Aphodenecus pullistercoris | |||
| 32023147 | 32023147 | PRJNA857857_P_NODE_17378_length_377_cov_0.838816_g16931_i0 | PRJNA857857 | 17378 | 377 | 0.838816 | 3.16233632 | FCB group | 1783270 | Bacteria | Bacteria | 49.7 | 1.69e-4 | NR | MFP4551293.1 | 2026792 | g16931 | i0 | 44.2 | 1.85411140583554 | 52 | 28 | 40.6 | 1 | 21 | 173 | 2 | 53 | MFP4551293.1 phytanoyl-CoA dioxygenase family protein [Spirochaetales bacterium] | diamond | 699 | 49.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;