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contig_metadata

21 rows where bioproject = "PRJNA857857", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 21 ✖

tax_kingdom 1

  • Metazoa · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA857857 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4673293 4673293 PRJNA857857_P_NODE_22264_length_331_cov_1.488372_g21815_i0 PRJNA857857 22264 331 1.488372 4.92651132 Rhabditida 6236 Nematoda Nematoda 139 1.88e-35   NR KAH7704060.1 70226 g21815 i0 62.7 13.8036253776435 110 40 98.8 1 327 1 576 685 KAH7704060.1 MRP-1 protein [Aphelenchoides avenae] diamond 4569 139 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
8498378 8498378 PRJNA857857_P_NODE_5547_length_659_cov_3.278157_g5133_i0 PRJNA857857 5547 659 3.278157 21.60305463 Enterobius vermicularis 51028 Nematoda Nematoda 231 1.62e-73   NR VDD87543.1 51028 g5133 i0 70.9 7.53869499241275 165 48 75.1 0 12 506 12 176 VDD87543.1 unnamed protein product, partial [Enterobius vermicularis] diamond 4968 231 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
8498421 8498421 PRJNA857857_P_NODE_7987_length_549_cov_7.077731_g7558_i0 PRJNA857857 7987 549 7.077731 38.85674319 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 284 3.68e-95   NR KAI6184284.1 293665 g7558 i0 78.1 4.66666666666667 169 37 92.3 0 42 548 16 184 KAI6184284.1 Peptidyl-prolyl cis-trans isomerase [Aphelenchoides bicaudatus] diamond 2562 284 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
11439643 11439643 PRJNA857857_P_NODE_6449_length_610_cov_5.754190_g6025_i0 PRJNA857857 6449 610 5.75419 35.100559 Rhabditida 6236 Nematoda Nematoda 174 1.08e-46   NR CDJ91769.1 6289 g6025 i0 63.8 9.95901639344262 149 54 73.3 0 125 571 612 760 CDJ91769.1 Carboxylesterase and Ribosomal protein L23 L25 and Ribosomal protein L25 L23 domain containing protein [Haemonchus contortus] diamond 6075 174 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
13599070 13599070 PRJNA857857_P_NODE_47831_length_244_cov_0.807018_g47382_i0 PRJNA857857 47831 244 0.807018 1.96912392 Strongyloides papillosus 174720 Nematoda Nematoda 54.7 0.006   NTclustered gi|690018501|emb|LM525739.1| 174720 g47382 i0 100 0.118852459016393 29 0 12 0 33 61 35663 35691 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000132 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
25070784 25070784 PRJNA857857_P_NODE_12640_length_443_cov_1.040541_g12196_i0 PRJNA857857 12640 443 1.040541 4.60959663 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 155 1.08e-42   NR TKR89185.1 34508 g12196 i0 52.8 26.9322799097065 144 68 97.5 0 8 439 37 180 TKR89185.1 hypothetical protein L596_013325 [Steinernema carpocapsae] diamond 11931 155 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
26801826 26801826 PRJNA857857_P_NODE_33341_length_265_cov_1.697917_g32892_i0 PRJNA857857 33341 265 1.697917 4.49948005 Strongylus vulgaris 40348 Nematoda Nematoda 142 1.61e-39   NR VDM68585.1 40348 g32892 i0 68.2 6.84905660377358 88 28 99.6 0 2 265 110 197 VDM68585.1 unnamed protein product, partial [Strongylus vulgaris] diamond 1815 142 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Strongylus Strongylus vulgaris
26936603 26936603 PRJNA857857_P_NODE_6702_length_598_cov_4.104762_g6276_i0 PRJNA857857 6702 598 4.104762 24.54647676 Rhabditida 6236 Nematoda Nematoda 79 7.49e-15   NR CAD5224984.1 6326 g6276 i0 38.2 2.11705685618729 144 80 72.2 4 537 106 1 135 CAD5224984.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 1266 79 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
27023425 27023425 PRJNA857857_P_NODE_22242_length_331_cov_2.193798_g21793_i0 PRJNA857857 22242 331 2.193798 7.26147138 Ditylenchus destructor 166010 Nematoda Nematoda 45.1 0.0161   NR KAI1728196.1 166010 g21793 i0 34.3 0.634441087613293 70 39 63.4 2 318 109 19 81 KAI1728196.1 innexin domain-containing protein [Ditylenchus destructor] diamond 210 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
27687297 27687297 PRJNA857857_P_NODE_42464_length_247_cov_0.885057_g42015_i0 PRJNA857857 42464 247 0.885057 2.18609079 Heterodera schachtii 97005 Nematoda Nematoda 129 4.33e-35   NR KAL3070918.1 97005 g42015 i0 85.7 3.40080971659919 70 10 85 0 211 2 96 165 KAL3070918.1 hypothetical protein niasHS_017043 [Heterodera schachtii] diamond 840 129 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera schachtii
27781764 27781764 PRJNA857857_P_NODE_51264_length_241_cov_0.916667_g50815_i0 PRJNA857857 51264 241 0.916667 2.20916747 Pristionchus pacificus 54126 Nematoda Nematoda 72.8 2.91e-13   NR KAF8366744.1 54126 g50815 i0 51.6 4.04564315352697 62 30 77.2 0 199 14 184 245 KAF8366744.1 scrm-1 [Pristionchus pacificus] diamond 975 72.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
28539651 28539651 PRJNA857857_P_NODE_41027_length_248_cov_0.880000_g40578_i0 PRJNA857857 41027 248 0.88 2.1824 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 155 2.8499999999999993e-42   NR CAD5235409.1 6326 g40578 i0 87.7 8.81854838709677 81 10 98 0 3 245 392 472 CAD5235409.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 2187 155 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
29242239 29242239 PRJNA857857_P_NODE_31209_length_276_cov_1.137931_g30760_i0 PRJNA857857 31209 276 1.137931 3.14068956 Rhabditida 6236 Nematoda Nematoda 59.7 5.94e-8   NR CAJ0587152.1 96644 g30760 i0 37.2 2.94565217391304 94 56 98.9 2 274 2 595 688 CAJ0587152.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 813 59.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
29368533 29368533 PRJNA857857_P_NODE_19649_length_353_cov_1.917857_g19200_i0 PRJNA857857 19649 353 1.917857 6.77003521 Metazoa 33208 Nematoda Nematoda 102 3.36e-23   NR KHN84763.1 6265 g19200 i0 42.2 22.3597733711048 109 61 90.9 2 8 328 199 307 KHN84763.1 Paxillin -like protein 1, partial [Toxocara canis] diamond 7893 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
30403081 30403081 PRJNA857857_P_NODE_43833_length_246_cov_0.890173_g43384_i0 PRJNA857857 43833 246 0.890173 2.18982558 Meloidogyne enterolobii 390850 Nematoda Nematoda 92 1.72e-19   NR CAK5025246.1 390850 g43384 i0 82.3 1.92682926829268 79 14 96.3 0 238 2 884 962 CAK5025246.1 unnamed protein product [Meloidogyne enterolobii] diamond 474 92 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
30592120 30592120 PRJNA857857_P_NODE_11013_length_473_cov_2.905000_g10573_i0 PRJNA857857 11013 473 2.905 13.74065 Pristionchus pacificus 54126 Nematoda Nematoda 114 2.57e-29   NR KAF8361249.1 54126 g10573 i0 46.5 1.80126849894292 142 72 88.8 3 443 24 4 143 KAF8361249.1 hypothetical protein PRIPAC_88172 [Pristionchus pacificus] diamond 852 114 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
30916502 30916502 PRJNA857857_P_NODE_31954_length_272_cov_1.296482_g31505_i0 PRJNA857857 31954 272 1.296482 3.52643104 Metazoa 33208 Nematoda Nematoda 78.6 1.35e-14   NR VBB31818.1 6277 g31505 i0 48.3 4.81985294117647 89 43 98.2 1 267 1 1112 1197 VBB31818.1 unnamed protein product [Acanthocheilonema viteae] diamond 1311 79 0.994936708860759 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
31232104 31232104 PRJNA857857_P_NODE_38595_length_250_cov_0.870056_g38146_i0 PRJNA857857 38595 250 0.870056 2.17514 Metazoa 33208 Nematoda Nematoda 59.3 2.71e-8   NR VDO37866.1 387005 g38146 i0 40.8 12.612 71 40 82.8 1 42 248 141 211 VDO37866.1 unnamed protein product [Onchocerca flexuosa] diamond 3153 59.7 0.993299832495812 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Onchocerca Onchocerca flexuosa
31445560 31445560 PRJNA857857_P_NODE_8036_length_548_cov_2.002105_g7607_i0 PRJNA857857 8036 548 2.002105 10.9715354 Steinernema carpocapsae 34508 Nematoda Nematoda 115 4.31e-29   NR TKR89804.1 34508 g7607 i0 45.9 0.81021897810219 148 74 79.9 4 493 56 1 144 TKR89804.1 hypothetical protein L596_013851 [Steinernema carpocapsae] diamond 444 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
31801442 31801442 PRJNA857857_P_NODE_7397_length_572_cov_1.200401_g6969_i0 PRJNA857857 7397 572 1.200401 6.86629372 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 251 1.55e-77   NR KRY40019.1 6334 g6969 i0 62 238.395104895105 179 68 93.9 0 30 566 367 545 KRY40019.1 ADP-ribosylation factor 1-like 2 [Trichinella spiralis] diamond 136362 252 0.996031746031746 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
32204852 32204852 PRJNA857857_P_NODE_8238_length_541_cov_3.271368_g7809_i0 PRJNA857857 8238 541 3.271368 17.69810088 Gongylonema pulchrum 637853 Nematoda Nematoda 125 3.52e-33   NR VDN19050.1 637853 g7809 i0 53.6 3.65988909426987 110 48 61 1 372 43 39 145 VDN19050.1 unnamed protein product [Gongylonema pulchrum] diamond 1980 125 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gongylonematidae Gongylonema Gongylonema pulchrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;