RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA857857", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA857857 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28002857 28002857 PRJNA857857_P_NODE_17825_length_372_cov_1.030100_g17377_i0 PRJNA857857 17825 372 1.0301 3.831972 Paraphysoderma sedebokerense 1500003 Fungi Fungi 130 2.31e-32   NR KAI9142890.1 1500003 g17377 i0 48.4 1 124 63 100 1 372 1 457 579 KAI9142890.1 hypothetical protein BKA69DRAFT_1123665 [Paraphysoderma sedebokerense] diamond 372 130 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
28791810 28791810 PRJNA857857_P_NODE_2407_length_954_cov_7.956867_g2092_i0 PRJNA857857 2407 954 7.956867 75.90851118 Paraphysoderma sedebokerense 1500003 Fungi Fungi 177 2.74e-50   NR KAI9138442.1 1500003 g2092 i0 42.2 0.745283018867924 237 126 72.3 3 225 914 2 234 KAI9138442.1 hypothetical protein BKA69DRAFT_1091793, partial [Paraphysoderma sedebokerense] diamond 711 177 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29084437 29084437 PRJNA857857_P_NODE_33268_length_266_cov_1.145078_g32819_i0 PRJNA857857 33268 266 1.145078 3.04590748 Eukaryota 2759 Fungi Fungi 64.3 1.22e-9   NR ORZ34794.1 765915 g32819 i0 40.2 2.49248120300752 87 42 90.2 2 266 27 215 298 ORZ34794.1 WD40-repeat-containing domain protein [Catenaria anguillulae PL171] diamond 663 64.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32615877 32615877 PRJNA857857_P_NODE_9520_length_507_cov_1.241935_g9083_i0 PRJNA857857 9520 507 1.241935 6.29661045 Paraphysoderma sedebokerense 1500003 Fungi Fungi 66.6 8.85e-10   NR KAI9139458.1 1500003 g9083 i0 34.1 1.56213017751479 132 79 78.1 4 110 505 36 159 KAI9139458.1 hypothetical protein BKA69DRAFT_1126537 [Paraphysoderma sedebokerense] diamond 792 66.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;