RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA857857", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 14 ✖

tax_kingdom 1

  • Bacillati · 14 ✖

bioproject 1

  • PRJNA857857 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3787536 3787536 PRJNA857857_P_NODE_28323_length_290_cov_1.903226_g27874_i0 PRJNA857857 28323 290 1.903226 5.5193554 Fimbriimonas 1005038 Bacteria Bacteria 433 8.21e-117   NTclustered gi|663071213|gb|CP007139.1| 661478 g27874 i0 93.793 275.610344827586 290 14 99 4 1 288 28816 29103 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 79927 433 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
16538168 16538168 PRJNA857857_P_NODE_22353_length_330_cov_2.252918_g21904_i0 PRJNA857857 22353 330 2.252918 7.4346294 Fimbriimonas 1005038 Bacteria Bacteria 566 8.97e-157   NTclustered gi|663071213|gb|CP007139.1| 661478 g21904 i0 97.576 199.281818181818 330 8 100 0 1 330 27399 27070 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 65763 566 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26611725 26611725 PRJNA857857_P_NODE_40121_length_249_cov_0.875000_g39672_i0 PRJNA857857 40121 249 0.875 2.17875 Armatimonadota bacterium 2033014 Bacteria Bacteria 90.1 8.43e-19   NR MBV9850127.1 2033014 g39672 i0 57.5 0.963855421686747 80 29 96.4 1 6 245 550 624 MBV9850127.1 hypothetical protein [Armatimonadota bacterium] diamond 240 90.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26833650 26833650 PRJNA857857_P_NODE_24141_length_318_cov_0.942857_g23692_i0 PRJNA857857 24141 318 0.942857 2.99828526 Armatimonadota bacterium 2033014 Bacteria Bacteria 47.4 0.00118   NR MBI2246800.1 2033014 g23692 i0 41 1.45283018867925 61 36 57.5 0 4 186 64 124 MBI2246800.1 ankyrin repeat domain-containing protein [Armatimonadota bacterium] diamond 462 47.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26968264 26968264 PRJNA857857_P_NODE_5022_length_693_cov_2.091935_g4615_i0 PRJNA857857 5022 693 2.091935 14.49710955 PVC group 1783257 Bacteria Bacteria 258 1.94e-77   NR HET6384180.1 2033014 g4615 i0 59.3 4.7012987012987 209 84 90.5 1 628 2 36 243 HET6384180.1 cellulase family glycosylhydrolase [Armatimonadota bacterium] diamond 3258 259 0.996138996138996 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28570899 28570899 PRJNA857857_P_NODE_25967_length_305_cov_0.995690_g25518_i0 PRJNA857857 25967 305 0.99569 3.0368545 Armatimonadota bacterium 2033014 Bacteria Bacteria 47 0.00223   NR MBA3727350.1 2033014 g25518 i0 36 0.737704918032787 75 47 72.8 1 301 80 35 109 MBA3727350.1 hypothetical protein [Armatimonadota bacterium] diamond 225 47 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28823310 28823310 PRJNA857857_P_NODE_7828_length_555_cov_1.275934_g7400_i0 PRJNA857857 7828 555 1.275934 7.0814337 Armatimonadota bacterium 2033014 Bacteria Bacteria 56.6 1.16e-5   NR HET6384180.1 2033014 g7400 i0 33.3 0.697297297297297 129 80 69.2 5 553 170 350 473 HET6384180.1 cellulase family glycosylhydrolase [Armatimonadota bacterium] diamond 387 56.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29549585 29549585 PRJNA857857_P_NODE_24630_length_314_cov_1.344398_g24181_i0 PRJNA857857 24630 314 1.344398 4.22140972 Capsulimonadaceae bacterium 2953755 Bacteria Bacteria 127 1.2e-31   NR MDR3709708.1 2953755 g24181 i0 58.3 3.93630573248408 103 43 98.4 0 311 3 395 497 MDR3709708.1 beta-galactosidase GalA [Capsulimonadaceae bacterium] diamond 1236 127 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae   Capsulimonadaceae bacterium
29707194 29707194 PRJNA857857_P_NODE_14610_length_412_cov_0.908555_g14163_i0 PRJNA857857 14610 412 0.908555 3.7432466 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 107 5.94e-24   NR HLK55891.1 2739509 g14163 i0 45.7 1.79126213592233 105 57 76.5 0 402 88 712 816 HLK55891.1 DUF5695 domain-containing protein [Chthonomonadaceae bacterium] diamond 738 107 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30253020 30253020 PRJNA857857_P_NODE_23612_length_321_cov_1.516129_g23163_i0 PRJNA857857 23612 321 1.516129 4.86677409 Bacteria 2 Bacteria Bacteria 60.5 5.52e-8   NR HET6384180.1 2033014 g23163 i0 35.8 3.5607476635514 95 59 87.9 2 319 38 332 425 HET6384180.1 cellulase family glycosylhydrolase [Armatimonadota bacterium] diamond 1143 60.8 0.995065789473684 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30466113 30466113 PRJNA857857_P_NODE_24613_length_314_cov_1.721992_g24164_i0 PRJNA857857 24613 314 1.721992 5.40705488 Armatimonadota bacterium 2033014 Bacteria Bacteria 82.8 7.11e-16   NR NSW54790.1 2033014 g24164 i0 47.3 0.888535031847134 93 47 88.9 1 297 19 40 130 NSW54790.1 cellulase family glycosylhydrolase [Armatimonadota bacterium] diamond 279 82.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31192136 31192136 PRJNA857857_P_NODE_20695_length_344_cov_1.129151_g20246_i0 PRJNA857857 20695 344 1.129151 3.88427944 Armatimonadota bacterium 2033014 Bacteria Bacteria 137 4.38e-35   NR MBI1332023.1 2033014 g20246 i0 57 0.994186046511628 114 48 99.4 1 1 342 366 478 MBI1332023.1 carbohydrate-binding protein [Armatimonadota bacterium] diamond 342 137 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32402859 32402859 PRJNA857857_P_NODE_5599_length_656_cov_2.051458_g5184_i0 PRJNA857857 5599 656 2.051458 13.45756448 Bacillati 1783272 Bacteria Bacteria 246 3.6e-72   NR WP_075165619.1 454171 g5184 i0 52 3.07774390243902 221 99 99.7 5 2 655 563 779 WP_075165619.1 beta-galactosidase GalA [Chthonomonas calidirosea] diamond 2019 246 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
32646997 32646997 PRJNA857857_P_NODE_580_length_1627_cov_2.703990_g438_i0 PRJNA857857 580 1627 2.70399 43.9939173 Chthonomonadales bacterium 2282151 Bacteria Bacteria 108 7.290000000000001e-22   NR NLI01589.1 2282151 g438 i0 31.5 0.833435771358328 216 145 39.8 3 241 888 62 274 NLI01589.1 cell wall anchor protein [Chthonomonadales bacterium] diamond 1356 108 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;