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contig_metadata

29 rows where bioproject = "PRJNA857857" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 29 ✖

bioproject 1

  • PRJNA857857 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8888667 8888667 PRJNA857857_P_NODE_31747_length_273_cov_1.360000_g31298_i0 PRJNA857857 31747 273 1.36 3.7128 Chlorophyta 3041 Plants Plants 98.6 2.3499999999999994e-23   NR GIL64998.1 51714 g31298 i0 54 6.50549450549451 87 40 95.6 0 261 1 7 93 GIL64998.1 hypothetical protein Vafri_18833 [Volvox africanus] diamond 1776 99 0.995959595959596 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
11439448 11439448 PRJNA857857_P_NODE_3249_length_839_cov_1.898172_g2893_i0 PRJNA857857 3249 839 1.898172 15.92566308 root 1 Root_unresolved Root_unresolved 58.4 0.002   NTclustered gi|2082245668|ref|XM_043062529.1| 3055 g2893 i0 91.111 0.557806912991657 45 1 5 1 387 428 1430 1386 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_05g246950v5), mRNA blastn 468 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13598446 13598446 PRJNA857857_P_NODE_14631_length_411_cov_2.423077_g14184_i0 PRJNA857857 14631 411 2.423077 9.95884647 Micractinium sp. CCAP 211/92 554058 Plants Plants 159 8.449999999999998e-48   NR KAL4437790.1 554058 g14184 i0 75 0.72992700729927 100 24 72.3 1 345 49 6 105 KAL4437790.1 hypothetical protein ABPG77_005702 [Micractinium sp. CCAP 211/92] diamond 300 159 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
13598492 13598492 PRJNA857857_P_NODE_16951_length_381_cov_1.961039_g16504_i0 PRJNA857857 16951 381 1.961039 7.47155859 Trebouxia 13786 Plants Plants 230 1.65e-69   NR KAA6420074.1 2608996 g16504 i0 87.3 4.96062992125984 126 16 99.2 0 3 380 216 341 KAA6420074.1 MAG: elongation factor [Trebouxia sp. A1-2] diamond 1890 230 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
16147853 16147853 PRJNA857857_P_NODE_38033_length_250_cov_0.870056_g37584_i0 PRJNA857857 38033 250 0.870056 2.17514 Trebouxia sp. C 2796353 Plants Plants 118 8.63e-29   NR KAL0052732.1 2905655 g37584 i0 69.5 16.728 82 25 98.4 0 3 248 167 248 KAL0052732.1 hypothetical protein WJX82_006742 [Trebouxia sp. C0006] diamond 4182 118 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006
23797666 23797666 PRJNA857857_P_NODE_52479_length_228_cov_3.025806_g52030_i0 PRJNA857857 52479 228 3.025806 6.89883768 Eukaryota 2759 Plants Plants 70.1 3.31e-13   NR KXZ49055.1 33097 g52030 i0 83.3 41 36 6 47.4 0 13 120 84 119 KXZ49055.1 hypothetical protein GPECTOR_23g140 [Gonium pectorale] diamond 9348 70.5 0.994326241134752 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
26928536 26928536 PRJNA857857_P_NODE_16422_length_388_cov_1.222222_g15975_i0 PRJNA857857 16422 388 1.222222 4.74222136 [Myrmecia] bisecta 41462 Plants Plants 92.8 5.23e-19   NR KAK9807851.1 41462 g15975 i0 40.4 0.804123711340206 104 61 79.6 1 78 386 53 156 KAK9807851.1 hypothetical protein WJX72_011324 [[Myrmecia] bisecta] diamond 312 92.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
26968262 26968262 PRJNA857857_P_NODE_40902_length_248_cov_0.880000_g40453_i0 PRJNA857857 40902 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 67.4 8.02e-11   NR KAJ9524260.1 44745 g40453 i0 51.7 2.95161290322581 60 26 69 1 11 181 473 532 KAJ9524260.1 hypothetical protein QJQ45_008453 [Haematococcus lacustris] diamond 732 67.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27244709 27244709 PRJNA857857_P_NODE_50603_length_242_cov_0.911243_g50154_i0 PRJNA857857 50603 242 0.911243 2.20520806 Raphidocelis subcapitata 307507 Plants Plants 48.9 2.54e-4   NR GBF89654.1 307507 g50154 i0 33.3 1.88429752066116 75 50 93 0 231 7 889 963 GBF89654.1 hypothetical protein Rsub_02372, partial [Raphidocelis subcapitata] diamond 456 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
27308130 27308130 PRJNA857857_P_NODE_18343_length_366_cov_11.911263_g17895_i0 PRJNA857857 18343 366 11.911263 43.59522258 Volvox africanus 51714 Plants Plants 60.5 3.34e-8   NR GIL57535.1 51714 g17895 i0 40 0.69672131147541 85 49 68.9 2 50 301 95 178 GIL57535.1 hypothetical protein Vafri_12745 [Volvox africanus] diamond 255 60.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
27339709 27339709 PRJNA857857_P_NODE_25683_length_307_cov_0.923077_g25234_i0 PRJNA857857 25683 307 0.923077 2.83384639 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 44.3 0.0234   NR KAF6256340.1 2650976 g25234 i0 42.6 0.45928338762215 47 27 45.9 0 280 140 238 284 KAF6256340.1 hypothetical protein COO60DRAFT_1658259 [Scenedesmus sp. NREL 46B-D3] diamond 141 44.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
27371437 27371437 PRJNA857857_P_NODE_23603_length_321_cov_1.572581_g23154_i0 PRJNA857857 23603 321 1.572581 5.04798501 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 138 7.77e-38   NR KAG7670504.1 1650286 g23154 i0 67.7 0.897196261682243 96 31 89.7 0 28 315 18 113 KAG7670504.1 hypothetical protein KSW81_003066 [Chlorella desiccata (nom. nud.)] diamond 288 138 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
28286601 28286601 PRJNA857857_P_NODE_36406_length_251_cov_1.730337_g35957_i0 PRJNA857857 36406 251 1.730337 4.34314587 Coccomyxa sp. Obi 2315456 Plants Plants 74.3 3.02e-13   NR BDA44569.1 2315456 g35957 i0 47.6 1.00398406374502 84 42 98 1 248 3 79 162 BDA44569.1 Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Coccomyxa sp. Obi] diamond 252 74.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
28665835 28665835 PRJNA857857_P_NODE_46447_length_244_cov_1.321637_g45998_i0 PRJNA857857 46447 244 1.321637 3.22479428 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 118 4.34e-29   NR KAF6264172.1 2650976 g45998 i0 73.5 5.07786885245902 68 18 83.6 0 36 239 49 116 KAF6264172.1 hypothetical protein COO60DRAFT_1281907 [Scenedesmus sp. NREL 46B-D3] diamond 1239 118 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
28791817 28791817 PRJNA857857_P_NODE_41227_length_248_cov_0.880000_g40778_i0 PRJNA857857 41227 248 0.88 2.1824 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 44.7 0.00851   NR KAF6261315.1 2650976 g40778 i0 37.7 0.641129032258065 53 33 64.1 0 237 79 977 1029 KAF6261315.1 hypothetical protein COO60DRAFT_1636898 [Scenedesmus sp. NREL 46B-D3] diamond 159 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
29171029 29171029 PRJNA857857_P_NODE_46789_length_244_cov_0.900585_g46340_i0 PRJNA857857 46789 244 0.900585 2.1974274 Coccomyxa subellipsoidea 248742 Plants Plants 76.6 4.31e-14   NR KAK9904056.1 248742 g46340 i0 43.4 1.02049180327869 83 44 98.4 3 5 244 128 210 KAK9904056.1 hypothetical protein WJX75_003534 [Coccomyxa subellipsoidea] diamond 249 76.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
29454674 29454674 PRJNA857857_P_NODE_24350_length_316_cov_1.584362_g23901_i0 PRJNA857857 24350 316 1.584362 5.00658392 Chlorella vulgaris 3077 Plants Plants 97.8 4.27e-21   NR KAL4856940.1 3077 g23901 i0 47.2 2.0126582278481 106 54 98.7 2 315 4 159 264 KAL4856940.1 Alpha-mannosidase [Chlorella vulgaris] diamond 636 97.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
29810423 29810423 PRJNA857857_P_NODE_9271_length_513_cov_1.038636_g8840_i0 PRJNA857857 9271 513 1.038636 5.32820268 Eukaryota 2759 Plants Plants 48.1 0.0073   NR GIL68720.1 51714 g8840 i0 58.1 1.11111111111111 31 13 18.1 0 236 144 2180 2210 GIL68720.1 hypothetical protein Vafri_21968 [Volvox africanus] diamond 570 48.5 0.991752577319588 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
30000184 30000184 PRJNA857857_P_NODE_16171_length_391_cov_1.452830_g15724_i0 PRJNA857857 16171 391 1.45283 5.6805653 Eukaryota 2759 Plants Plants 129 2.0199999999999998e-32   NR WIA33616.1 3088 g15724 i0 54.3 5.9923273657289 129 56 99 2 4 390 280 405 WIA33616.1 hypothetical protein OEZ86_006739 [Tetradesmus obliquus] diamond 2343 129 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30031734 30031734 PRJNA857857_P_NODE_8891_length_522_cov_1.759465_g8460_i0 PRJNA857857 8891 522 1.759465 9.1844073 Eukaryota 2759 Plants Plants 65.1 2.76e-9   NR WIA22848.1 3088 g8460 i0 30.9 3.10919540229885 123 67 69.5 3 370 8 7 113 WIA22848.1 hypothetical protein OEZ85_001237 [Tetradesmus obliquus] diamond 1623 65.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30434572 30434572 PRJNA857857_P_NODE_17313_length_377_cov_2.164474_g16866_i0 PRJNA857857 17313 377 2.164474 8.16006698 Chlorella vulgaris 3077 Plants Plants 87 6.14e-19   NR KAL4858628.1 3077 g16866 i0 55.7 4.71087533156499 88 37 68.4 1 301 44 55 142 KAL4858628.1 60S ribosomal protein L36-3 [Chlorella vulgaris] diamond 1776 87 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
30537178 30537178 PRJNA857857_P_NODE_15953_length_394_cov_1.133956_g15506_i0 PRJNA857857 15953 394 1.133956 4.46778664 Picochlorum 249344 Plants Plants 50.1 5.44e-4   NR WPT15180.1 1470871 g15506 i0 52.2 0.700507614213198 46 20 33.5 1 17 148 386 431 WPT15180.1 Guanine nucleotide-binding protein subunit beta-like protein [Picochlorum sp. SENEW3] diamond 276 50.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
30758393 30758393 PRJNA857857_P_NODE_24974_length_312_cov_0.966527_g24525_i0 PRJNA857857 24974 312 0.966527 3.01556424 Eukaryota 2759 Plants Plants 68.9 5.37e-11   NR CAD7705365.1 121088 g24525 i0 52.3 2.14423076923077 65 31 62.5 0 199 5 898 962 CAD7705365.1 unnamed protein product [Ostreobium quekettii] diamond 669 68.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
31192146 31192146 PRJNA857857_P_NODE_50155_length_242_cov_0.911243_g49706_i0 PRJNA857857 50155 242 0.911243 2.20520806 Monoraphidium neglectum 145388 Plants Plants 43.1 0.0262   NR XP_013904614.1 145388 g49706 i0 26.3 1.88429752066116 76 51 94.2 1 7 234 42 112 XP_013904614.1 flagellar associated protein [Monoraphidium neglectum] diamond 456 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
31833099 31833099 PRJNA857857_P_NODE_20517_length_345_cov_2.180147_g20068_i0 PRJNA857857 20517 345 2.180147 7.52150715 Eukaryota 2759 Plants Plants 119 8.87e-29   NR PRW33606.1 3076 g20068 i0 55.4 36 101 41 84.3 1 54 344 16 116 PRW33606.1 peptidyl-prolyl cis-trans isomerase FKBP62-like isoform A [Chlorella sorokiniana] diamond 12420 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31856666 31856666 PRJNA857857_P_NODE_5777_length_646_cov_2.129145_g5360_i0 PRJNA857857 5777 646 2.129145 13.7542767 Ostreobium quekettii 121088 Plants Plants 50.1 0.00283   NR CAD7695302.1 121088 g5360 i0 28 0.613003095975232 132 92 60.4 3 439 50 67 197 CAD7695302.1 unnamed protein product [Ostreobium quekettii] diamond 396 50.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
32109859 32109859 PRJNA857857_P_NODE_29498_length_284_cov_2.151659_g29049_i0 PRJNA857857 29498 284 2.151659 6.11071156 Coccomyxa sp. Obi 2315456 Plants Plants 72.4 1.95e-12   NR BDA50104.1 2315456 g29049 i0 49.3 2.07042253521127 73 36 76.1 1 6 221 22 94 BDA50104.1 Heptahelical transmembrane protein 4 [Coccomyxa sp. Obi] diamond 588 72.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
32363212 32363212 PRJNA857857_P_NODE_17079_length_380_cov_1.250814_g16632_i0 PRJNA857857 17079 380 1.250814 4.7530932 [Myrmecia] bisecta 41462 Plants Plants 112 7.29e-26   NR KAK9807851.1 41462 g16632 i0 44.3 0.963157894736842 122 63 93.9 3 23 379 136 255 KAK9807851.1 hypothetical protein WJX72_011324 [[Myrmecia] bisecta] diamond 366 112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
32899099 32899099 PRJNA857857_P_NODE_52060_length_241_cov_0.916667_g51611_i0 PRJNA857857 52060 241 0.916667 2.20916747 Tetradesmus obliquus 3088 Plants Plants 84 1.06e-16   NR WIA41796.1 3088 g51611 i0 47.7 1.0954356846473 88 37 98.3 1 239 3 267 354 WIA41796.1 hypothetical protein OEZ86_009128 [Tetradesmus obliquus] diamond 264 84 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;