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contig_metadata

25 rows where bioproject = "PRJNA857857", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 25 ✖

tax_clade 1

  • Sar · 25 ✖

bioproject 1

  • PRJNA857857 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2120869 2120869 PRJNA857857_P_NODE_6122_length_628_cov_3.019820_g5702_i0 PRJNA857857 6122 628 3.01982 18.9644696 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 2.5399999999999996e-32   NR KAL0587684.1 65357 g5702 i0 55.7 2.75636942675159 115 44 54.9 2 372 28 26 133 KAL0587684.1 hypothetical protein ABG067_002703 [Albugo candida] diamond 1731 125 0.992 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
9773105 9773105 PRJNA857857_P_NODE_32728_length_268_cov_3.015385_g32279_i0 PRJNA857857 32728 268 3.015385 8.0812318 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 78.6 3.23e-17   NR CCI45616.1 65357 g32279 i0 79.2 7.89179104477612 48 10 53.7 0 250 107 4 51 CCI45616.1 unnamed protein product [Albugo candida] diamond 2115 78.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
11048285 11048285 PRJNA857857_P_NODE_1209_length_1260_cov_6.088458_g989_i0 PRJNA857857 1209 1260 6.088458 76.7145708 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 254 1.33e-78   NR KAI9989638.1 4787 g989 i0 56.6 10.3357142857143 249 102 59.3 1 1260 514 28 270 KAI9989638.1 hypothetical protein PInf_019923 [Phytophthora infestans] diamond 13023 256 0.9921875 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
11048402 11048402 PRJNA857857_P_NODE_19349_length_356_cov_1.897527_g18901_i0 PRJNA857857 19349 356 1.897527 6.75519612 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 159 2.19e-44   NR CAH0479183.1 622444 g18901 i0 82 17.4859550561798 100 18 84.3 0 52 351 1 100 CAH0479183.1 unnamed protein product [Peronospora belbahrii] diamond 6225 159 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
12715334 12715334 PRJNA857857_P_NODE_39650_length_249_cov_0.875000_g39201_i0 PRJNA857857 39650 249 0.875 2.17875 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 141 1.28e-39   NR RLN92416.1 2483409 g39201 i0 70.7 3.92771084337349 82 24 98.8 0 3 248 16 97 RLN92416.1 hypothetical protein BBJ28_00022396 [Nothophytophthora sp. Chile5] diamond 978 141 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
16148236 16148236 PRJNA857857_P_NODE_9233_length_514_cov_1.190476_g8802_i0 PRJNA857857 9233 514 1.190476 6.11904664 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 71.3 1.39e-7   NTclustered gi|325196873|emb|FR827661.1| 890382 g8802 i0 100 13.0739299610895 38 0 7 0 467 504 65 28 Albugo laibachii Nc14, genomic contig CONTIG_4828_NC14_v4_162_619 blastn 6720 71.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
25070873 25070873 PRJNA857857_P_NODE_18100_length_369_cov_1.375000_g17652_i0 PRJNA857857 18100 369 1.375 5.07375 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 427 4.99e-115   NTclustered gi|2795021165|ref|XM_067935669.1| 4785 g17652 i0 92.617 18.6693766937669 298 21 80 1 1 297 317 20 Phytophthora cinnamomi ATP synthase subunit beta, mitochondrial (IUM83_11126), partial mRNA blastn 6889 427 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
27157766 27157766 PRJNA857857_P_NODE_48482_length_243_cov_0.905882_g48033_i0 PRJNA857857 48482 243 0.905882 2.20129326 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 111 1.74e-27   NR KAG1689475.1 4784 g48033 i0 59.3 19.9012345679012 81 33 100 0 243 1 38 118 KAG1689475.1 Protein MAK16 A [Phytophthora capsici] diamond 4836 111 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
27442760 27442760 PRJNA857857_P_NODE_45043_length_245_cov_1.191860_g44594_i0 PRJNA857857 45043 245 1.19186 2.920057 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 87 5.66e-18   NR CCI48387.1 65357 g44594 i0 63.9 2.98775510204082 61 20 74.7 1 60 242 269 327 CCI48387.1 unnamed protein product [Albugo candida] diamond 732 87 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
28129072 28129072 PRJNA857857_P_NODE_43185_length_247_cov_0.885057_g42736_i0 PRJNA857857 43185 247 0.885057 2.18609079 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 61.6 7.26e-9   NR XP_009523249.1 67593 g42736 i0 58.2 0.959514170040486 79 32 96 1 245 9 181 258 XP_009523249.1 hypothetical protein PHYSODRAFT_543878 [Phytophthora sojae] diamond 237 61.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
28665824 28665824 PRJNA857857_P_NODE_23507_length_322_cov_1.232932_g23058_i0 PRJNA857857 23507 322 1.232932 3.97004104 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 99.4 1.2300000000000002e-21   NR OQS02943.1 74557 g23058 i0 50.9 2.03105590062112 110 49 99.7 2 322 2 340 447 OQS02943.1 U3 small nucleolar ribonucleoprotein [Thraustotheca clavata] diamond 654 99.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
29360384 29360384 PRJNA857857_P_NODE_19869_length_351_cov_1.661871_g19420_i0 PRJNA857857 19869 351 1.661871 5.83316721 Phytophthora lilii 2077276 SAR_Eukaryotes SAR_Eukaryotes 55.1 4.75e-6   NR GMF27689.1 2077276 g19420 i0 43 1.64957264957265 79 44 66.7 1 117 350 111 189 GMF27689.1 unnamed protein product [Phytophthora lilii] diamond 579 55.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lilii
30000189 30000189 PRJNA857857_P_NODE_33391_length_265_cov_1.203125_g32942_i0 PRJNA857857 33391 265 1.203125 3.18828125 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.14e-11   NR KAK1947202.1 4793 g32942 i0 36.9 10.2452830188679 103 47 96.2 2 265 11 126 228 KAK1947202.1 Actin-fragmin kinase [Phytophthora citrophthora] diamond 2715 70.5 0.994326241134752 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
30560360 30560360 PRJNA857857_P_NODE_12853_length_439_cov_7.032787_g12408_i0 PRJNA857857 12853 439 7.032787 30.87393493 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 189 2.75e-58   NR OQR92500.1 1202772 g12408 i0 63.8 9.45102505694761 138 50 94.3 0 26 439 36 173 OQR92500.1 ribosomal protein L27 [Achlya hypogyna] diamond 4149 189 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
30568478 30568478 PRJNA857857_P_NODE_16633_length_385_cov_2.137821_g16186_i0 PRJNA857857 16633 385 2.137821 8.23061085 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 86.7 3.71e-19   NR XP_067814465.1 4779 g16186 i0 48.5 2.37662337662338 103 51 79.5 2 59 364 1 102 XP_067814465.1 uncharacterized protein CCR75_006070 [Bremia lactucae] diamond 915 86.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
30750246 30750246 PRJNA857857_P_NODE_32974_length_267_cov_1.587629_g32525_i0 PRJNA857857 32974 267 1.587629 4.23896943 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 111 3.19e-26   NR TMW56879.1 41045 g32525 i0 59.1 1.04494382022472 93 34 100 2 267 1 141 233 TMW56879.1 hypothetical protein Poli38472_006889 [Pythium oligandrum] diamond 279 111 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30821569 30821569 PRJNA857857_P_NODE_8454_length_535_cov_1.248918_g8025_i0 PRJNA857857 8454 535 1.248918 6.6817113 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 5.22e-24   NR TMW62552.1 41045 g8025 i0 37 3 181 100 96.4 4 6 521 190 365 TMW62552.1 hypothetical protein Poli38472_005170 [Pythium oligandrum] diamond 1605 109 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31200235 31200235 PRJNA857857_P_NODE_28155_length_291_cov_2.674312_g27706_i0 PRJNA857857 28155 291 2.674312 7.78224792 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 138 5.8e-36   NR DAZ99584.1 4803 g27706 i0 73 46.1030927835052 89 24 91.8 0 272 6 95 183 DAZ99584.1 TPA: hypothetical protein N0F65_001412 [Lagenidium giganteum] diamond 13416 139 0.992805755395683 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31477354 31477354 PRJNA857857_P_NODE_43976_length_246_cov_0.890173_g43527_i0 PRJNA857857 43976 246 0.890173 2.18982558 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 49.7 1.39e-4   NR TMW63286.1 41045 g43527 i0 40 0.975609756097561 80 47 97.6 1 3 242 378 456 TMW63286.1 hypothetical protein Poli38472_002227 [Pythium oligandrum] diamond 240 49.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31572226 31572226 PRJNA857857_P_NODE_16216_length_391_cov_0.864780_g15769_i0 PRJNA857857 16216 391 0.86478 3.3812898 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 68.9 1.36e-10   NR XP_012197006.1 695850 g15769 i0 32.2 0.90537084398977 118 75 87.5 3 388 47 534 650 XP_012197006.1 hypothetical protein SPRG_03035 [Saprolegnia parasitica CBS 223.65] diamond 354 68.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
31611918 31611918 PRJNA857857_P_NODE_31976_length_272_cov_1.160804_g31527_i0 PRJNA857857 31976 272 1.160804 3.15738688 root 1 Root_unresolved Root_unresolved 74.3 3.98e-13   NR XP_008862995.1 157072 g31527 i0 40.7 3.9375 91 53 99.3 1 270 1 387 477 XP_008862995.1 hypothetical protein H310_01616 [Aphanomyces invadans] diamond 1071 74.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
31635244 31635244 PRJNA857857_P_NODE_36596_length_251_cov_0.865169_g36147_i0 PRJNA857857 36596 251 0.865169 2.17157419 Phytophthora palmivora 4796 SAR_Eukaryotes SAR_Eukaryotes 50.1 7.26e-5   NR POM60513.1 4796 g36147 i0 47.1 2.43824701195219 51 20 56.2 2 6 146 169 216 POM60513.1 hypothetical protein PHPALM_30627 [Phytophthora palmivora] diamond 612 50.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
31698576 31698576 PRJNA857857_P_NODE_13917_length_422_cov_1.323782_g13471_i0 PRJNA857857 13917 422 1.323782 5.58636004 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 141 9.17e-36   NR TMW65555.1 41045 g13471 i0 60.9 3.8175355450237 133 49 93.1 3 6 398 700 831 TMW65555.1 hypothetical protein Poli38472_008197 [Pythium oligandrum] diamond 1611 141 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
32371330 32371330 PRJNA857857_P_NODE_21499_length_337_cov_1.617424_g21050_i0 PRJNA857857 21499 337 1.617424 5.45071888 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 57.8 6.08e-7   NR OQR99579.1 74557 g21050 i0 40.6 6.31157270029674 69 41 61.4 0 39 245 1316 1384 OQR99579.1 hypothetical protein THRCLA_06454 [Thraustotheca clavata] diamond 2127 57.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
32781276 32781276 PRJNA857857_P_NODE_44540_length_246_cov_0.890173_g44091_i0 PRJNA857857 44540 246 0.890173 2.18982558 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.3 3.22e-6   NR KAG9399817.1 112091 g44091 i0 32.3 8.13414634146342 93 50 97.6 2 242 3 56 148 KAG9399817.1 GATOR complex protein wdr59 [Aphanomyces cochlioides] diamond 2001 54.7 0.992687385740402 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;