RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA857857", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA857857 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11048989 11048989 PRJNA857857_P_NODE_47269_length_244_cov_0.900585_g46820_i0 PRJNA857857 47269 244 0.900585 2.1974274 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.19e-7   NTclustered gi|916500485|ref|XM_013495603.1| 44415 g46820 i0 78.378 18.1926229508197 111 21 44 2 131 238 28 138 Eimeria mitis uncharacterized protein (EMH_0001510), partial mRNA blastn 4439 69.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
16148120 16148120 PRJNA857857_P_NODE_50193_length_242_cov_0.911243_g49744_i0 PRJNA857857 50193 242 0.911243 2.20520806 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1620126987|ref|XM_028673264.1| 5849 g49744 i0 100 0.371900826446281 30 0 12 0 87 116 1182 1153 Plasmodium gallinaceum conserved Plasmodium protein, unknown function (PGAL8A_00451200), partial mRNA blastn 90 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
21637812 21637812 PRJNA857857_P_NODE_38597_length_250_cov_0.870056_g38148_i0 PRJNA857857 38597 250 0.870056 2.17514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|915012308|ref|XM_013396207.1| 5801 g38148 i0 96.774 0.908 31 1 12 0 61 91 3836 3866 Eimeria acervulina WD40 repeat-containing protein, related partial mRNA blastn 227 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
28697455 28697455 PRJNA857857_P_NODE_20247_length_348_cov_1.105455_g19798_i0 PRJNA857857 20247 348 1.105455 3.8469834 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 137 2.24e-35   NR KAF8819766.1 476202 g19798 i0 51.3 2.02586206896552 117 55 99.1 1 346 2 432 548 KAF8819766.1 pyridine nucleotide-disulfide oxidoreductase domain-containing protein [Cardiosporidium cionae] diamond 705 137 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;