RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA857857", tax_clade = "Opisthokonta" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA857857 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17423061 17423061 PRJNA857857_P_NODE_25314_length_309_cov_1.305085_g24865_i0 PRJNA857857 25314 309 1.305085 4.03271265 Rozella allomycis CSF55 988480 Fungi Fungi 162 4.119999999999999e-47   NR RKP17846.1 988480 g24865 i0 73.3 16.6601941747573 101 27 98.1 0 308 6 82 182 RKP17846.1 methionine aminopeptidase, partial [Rozella allomycis CSF55] diamond 5148 162 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28065788 28065788 PRJNA857857_P_NODE_35925_length_253_cov_2.138889_g35476_i0 PRJNA857857 35925 253 2.138889 5.41138917 Rozella allomycis CSF55 988480 Fungi Fungi 121 1.2099999999999999e-31   NR RKP19570.1 988480 g35476 i0 70.2 4.95652173913043 84 25 99.6 0 1 252 134 217 RKP19570.1 calcium/proton exchanger, partial [Rozella allomycis CSF55] diamond 1254 121 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;