RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA857857", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA857857 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28129073 28129073 PRJNA857857_P_NODE_45905_length_245_cov_0.895349_g45456_i0 PRJNA857857 45905 245 0.895349 2.19360505 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 42.7 0.0372   NR MDP6595032.1 2026781 g45456 i0 32.7 0.636734693877551 52 35 63.7 0 181 26 152 203 MDP6595032.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 156 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30253032 30253032 PRJNA857857_P_NODE_7352_length_573_cov_2.348000_g6924_i0 PRJNA857857 7352 573 2.348 13.454040000000001 Bacteria 2 Bacteria Bacteria 191 5.47e-57   NR MFC1718550.1 2026781 g6924 i0 50.8 9.38743455497382 179 88 93.7 0 547 11 5 183 MFC1718550.1 dihydrodipicolinate synthase family protein [Candidatus Poribacteria bacterium] diamond 5379 192 0.994791666666667 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31422072 31422072 PRJNA857857_P_NODE_5656_length_653_cov_1.318966_g5241_i0 PRJNA857857 5656 653 1.318966 8.61284798 Bacillati 1783272 Bacteria Bacteria 239 2.25e-75   NR HDO76627.1 2026781 g5241 i0 56.9 4.00153139356815 216 85 98.3 4 5 646 98 307 HDO76627.1 N-acetylgalactosamine-6-sulfatase [Candidatus Poribacteria bacterium] diamond 2613 241 0.991701244813278 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;