RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA857857", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Fervidibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fervidibacterota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA857857 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30663539 30663539 PRJNA857857_P_NODE_46773_length_244_cov_0.900585_g46324_i0 PRJNA857857 46773 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 91.7 8.8e-21   NR GBC99978.1 2035412 g46324 i0 69.8 1.9672131147541 53 16 65.2 0 160 2 1 53 GBC99978.1 hypothetical protein HRbin17_02511 [bacterium HR17] diamond 480 92.4 0.992424242424242 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;