RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA857143" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA857143 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26714686 26714686 PRJNA857143_S_NODE_199841_length_229_cov_4.987179_g198748_i0 PRJNA857143 199841 229 4.987179 11.42063991 Archaea 2157 Archaea Archaea 77 2.3e-14   NR OLS14603.1 1849166 g198748 i0 79.1 1.1528384279476 43 9 56.3 0 228 100 374 416 OLS14603.1 MAG: acetyl-CoA acetyltransferase [Promethearchaeota archaeon CR_4] diamond 264 77 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
32844327 32844327 PRJNA857143_S_NODE_101380_length_311_cov_7.420168_g100287_i0 PRJNA857143 101380 311 7.420168 23.07672248 Archaea 2157 Archaea Archaea 114 1.05e-27   NR OLS14603.1 1849166 g100287 i0 74.3 1.35048231511254 70 18 67.5 0 2 211 348 417 OLS14603.1 MAG: acetyl-CoA acetyltransferase [Promethearchaeota archaeon CR_4] diamond 420 115 0.991304347826087 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;