RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA857143" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857143 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
843183 843183 PRJNA857143_S_NODE_13921_length_602_cov_17.996219_g12883_i0 PRJNA857143 13921 602 17.996219 108.33723838 Astathelohania contejeani 164912 Fungi Fungi 181 1.9499999999999998e-54   NR KAF7683006.1 164912 g12883 i0 72.6 0.583056478405316 117 32 58.3 0 601 251 55 171 KAF7683006.1 60S ribosomal protein L11 [Astathelohania contejeani] diamond 351 181 1 Eukaryota Opisthokonta Fungi Microsporidia     Astathelohaniidae Astathelohania Astathelohania contejeani
14870975 14870975 PRJNA857143_S_NODE_119812_length_292_cov_3.543379_g118719_i0 PRJNA857143 119812 292 3.543379 10.34666668 Vairimorpha bombi 40135 Fungi Fungi 77 5.84e-14   NR KAK6090560.1 40135 g118719 i0 65.5 1.13013698630137 55 19 56.5 0 291 127 442 496 KAK6090560.1 hypothetical protein P3W45_000283 [Vairimorpha bombi] diamond 330 77 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha bombi
32308175 32308175 PRJNA857143_S_NODE_176999_length_249_cov_3.238636_g175906_i0 PRJNA857143 176999 249 3.238636 8.06420364 Nematocida 586132 Fungi Fungi 47.8 6.02e-4   NR XP_067543783.1 1805483 g175906 i0 39 2.4578313253012 82 43 90.4 4 3 227 174 255 XP_067543783.1 transformer-2 protein [Nematocida displodere] diamond 612 47.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida displodere

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;