RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA857143" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA857143 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27560423 27560423 PRJNA857143_S_NODE_30724_length_462_cov_2.071979_g29632_i0 PRJNA857143 30724 462 2.071979 9.57254298 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 70.9 6.76e-12   NR MDR0651219.1 2053688 g29632 i0 45.1 0.461038961038961 71 38 46.1 1 141 353 57 126 MDR0651219.1 hypothetical protein [Candidatus Peribacteria bacterium] diamond 213 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
28886591 28886591 PRJNA857143_S_NODE_131708_length_281_cov_5.076923_g130615_i0 PRJNA857143 131708 281 5.076923 14.26615363 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 86.3 6.34e-18   NR MBI3618907.1 2030811 g130615 i0 75 2.50889679715302 56 14 59.8 0 2 169 225 280 MBI3618907.1 pyridoxal 5'-phosphate synthase lyase subunit PdxS [Candidatus Peregrinibacteria bacterium] diamond 705 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
29549568 29549568 PRJNA857143_S_NODE_191850_length_243_cov_1.376471_g190757_i0 PRJNA857143 191850 243 1.376471 3.34482453 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 77.4 1.04e-14   NR MCA9374224.1 2030811 g190757 i0 55.7 0.753086419753086 61 27 75.3 0 3 185 235 295 MCA9374224.1 uridine phosphorylase [Candidatus Peregrinibacteria bacterium] diamond 183 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;