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contig_metadata

34 rows where bioproject = "PRJNA857143", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 34 ✖

tax_phylum 1

  • Acidobacteriota · 34 ✖

tax_kingdom 1

bioproject 1

  • PRJNA857143 · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
843660 843660 PRJNA857143_S_NODE_183561_length_247_cov_0.896552_g182468_i0 PRJNA857143 183561 247 0.896552 2.21448344 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 52.8 0.022   NTclustered gi|2874254091|emb|OY970174.1| 171953 g182468 i0 100 0.11336032388664 28 0 11 0 116 143 4033312 4033285 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
3394201 3394201 PRJNA857143_S_NODE_169143_length_253_cov_1.077778_g168050_i0 PRJNA857143 169143 253 1.077778 2.72677834 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 187 6.0299999999999984e-43   NTclustered gi|2874253700|emb|OY969426.1| 2651171 g168050 i0 81.739 111.379446640316 230 37 89 5 1 226 3767735 3767963 MAG: Thermoanaerobaculia bacterium isolate MFD02979.bin.c.1 genome assembly, chromosome: 1 blastn 28179 187 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
8496708 8496708 PRJNA857143_S_NODE_195887_length_241_cov_2.166667_g194794_i0 PRJNA857143 195887 241 2.166667 5.22166747 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 154 5.78e-33   NTclustered gi|2893358436|emb|OZ220728.1| 2910147 g194794 i0 81.915 0.780082987551867 188 29 77 5 31 216 3722110 3721926 MAG: Vicinamibacterales bacterium isolate 73bbec36-abbb-48ff-8f96-0d8513c84f17 genome assembly, chromosome: 1 blastn 188 154 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
11046965 11046965 PRJNA857143_S_NODE_152349_length_265_cov_1.218750_g151256_i0 PRJNA857143 152349 265 1.21875 3.2296875 Luteitalea sp. TBR-22 2802971 Bacteria Bacteria 303 6.06e-78   NTclustered gi|2131947417|dbj|AP024452.2| 2802971 g151256 i0 87.5 165.841509433962 264 31 99 2 1 263 4534604 4534342 Vicinamibacteria bacterium TBR-22 DNA, complete genome blastn 43948 303 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp. TBR-22
13596929 13596929 PRJNA857143_S_NODE_137231_length_277_cov_1.147059_g136138_i0 PRJNA857143 137231 277 1.147059 3.17735343 Candidatus Solibacter sp. 2068625 Bacteria Bacteria 89 2.61e-18   NR HXA42969.1 2068625 g136138 i0 61.3 2.71841155234657 62 24 67.1 0 272 87 388 449 HXA42969.1 flavin monoamine oxidase family protein [Candidatus Solibacter sp.] diamond 753 89 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Solibacter Candidatus Solibacter sp.
13598365 13598365 PRJNA857143_S_NODE_99191_length_314_cov_1.618257_g98098_i0 PRJNA857143 99191 314 1.618257 5.08132698 Geothrix sp. 1962974 Bacteria Bacteria 56.5 0.002   NTclustered gi|2515262989|gb|CP126625.1| 1962974 g98098 i0 100 0.184713375796178 30 0 10 0 52 81 1874516 1874545 MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome blastn 58 56.5 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp.
15263284 15263284 PRJNA857143_S_NODE_38492_length_429_cov_10.867978_g37400_i0 PRJNA857143 38492 429 10.867978 46.62362562 Acidobacteriota bacterium 1978231 Bacteria Bacteria 147 7.619999999999999e-43   NR MDQ7008653.1 1978231 g37400 i0 79.3 0.776223776223776 111 19 75.5 2 25 348 2 111 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 333 147 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
16147217 16147217 PRJNA857143_S_NODE_89553_length_326_cov_0.944664_g88460_i0 PRJNA857143 89553 326 0.944664 3.07960464 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 107 4.92e-26   NR HVH55876.1 2910147 g88460 i0 56.5 0.846625766871166 92 40 84.7 0 51 326 113 204 HVH55876.1 J domain-containing protein [Vicinamibacterales bacterium] diamond 276 107 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27181319 27181319 PRJNA857143_S_NODE_171622_length_252_cov_0.871508_g170529_i0 PRJNA857143 171622 252 0.871508 2.19620016 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 73.9 5.95e-15   NR HEY4642852.1 2651171 g170529 i0 50.7 2.39285714285714 67 33 79.8 0 252 52 18 84 HEY4642852.1 RNA-binding protein [Thermoanaerobaculia bacterium] diamond 603 73.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27244686 27244686 PRJNA857143_S_NODE_79103_length_340_cov_1.460674_g78010_i0 PRJNA857143 79103 340 1.460674 4.9662916 Acidobacteriota bacterium 1978231 Bacteria Bacteria 56.6 1.33e-6   NR MDE3156438.1 1978231 g78010 i0 39.8 0.732352941176471 83 43 69.7 3 16 252 184 263 MDE3156438.1 thrombospondin type-1 domain-containing protein [Acidobacteriota bacterium] diamond 249 56.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27758534 27758534 PRJNA857143_S_NODE_34824_length_443_cov_7.127027_g33732_i0 PRJNA857143 34824 443 7.127027 31.57272961 Pseudomonadati 3379134 Bacteria Bacteria 65.1 5.18e-9   NR MBZ5608083.1 2081523 g33732 i0 50 2.30248306997743 58 29 39.3 0 438 265 812 869 MBZ5608083.1 ATP-dependent chaperone ClpB [Terriglobia bacterium] diamond 1020 65.5 0.993893129770992 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
27813431 27813431 PRJNA857143_S_NODE_169704_length_253_cov_0.866667_g168611_i0 PRJNA857143 169704 253 0.866667 2.19266751 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 55.1 1.78e-6   NR HLL76016.1 2283092 g168611 i0 49 0.58102766798419 49 25 58.1 0 1 147 272 320 HLL76016.1 DUF4231 domain-containing protein [Pyrinomonadaceae bacterium] diamond 147 55.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27876270 27876270 PRJNA857143_S_NODE_143205_length_272_cov_1.221106_g142112_i0 PRJNA857143 143205 272 1.221106 3.32140832 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 44.7 0.0108   NR HXT21456.1 2651171 g142112 i0 35.1 0.849264705882353 77 45 79.4 2 261 46 201 277 HXT21456.1 bifunctional class I SAM-dependent methyltransferase/glycosyltransferase family 2 protein [Thermoanaerobaculia bacterium] diamond 231 44.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28381517 28381517 PRJNA857143_S_NODE_5766_length_825_cov_5.603723_g4984_i0 PRJNA857143 5766 825 5.603723 46.23071475 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.5 2.68e-7   NR MBX3294082.1 1978231 g4984 i0 58.8 0.185454545454545 51 21 18.5 0 80 232 573 623 MBX3294082.1 hypothetical protein [Acidobacteriota bacterium] diamond 153 63.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28539627 28539627 PRJNA857143_S_NODE_155567_length_262_cov_2.116402_g154474_i0 PRJNA857143 155567 262 2.116402 5.54497324 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 52.4 1.77e-5   NR MDR3737318.1 2052142 g154474 i0 47.8 0.767175572519084 67 34 75.6 1 262 65 246 312 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 201 52.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
28570883 28570883 PRJNA857143_S_NODE_193767_length_242_cov_1.686391_g192674_i0 PRJNA857143 193767 242 1.686391 4.08106622 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 92.8 1.52e-20   NR HSS44866.1 2651171 g192674 i0 76 0.619834710743802 50 12 62 0 226 77 247 296 HSS44866.1 DUF1684 domain-containing protein [Thermoanaerobaculia bacterium] diamond 150 92.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28981631 28981631 PRJNA857143_S_NODE_165288_length_255_cov_1.928571_g164195_i0 PRJNA857143 165288 255 1.928571 4.91785605 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.8 0.00375   NR MDQ7006104.1 1978231 g164195 i0 32.4 0.8 68 42 80 1 231 28 1432 1495 MDQ7006104.1 reverse transcriptase domain-containing protein [Acidobacteriota bacterium] diamond 204 45.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29234098 29234098 PRJNA857143_S_NODE_170329_length_252_cov_2.178771_g169236_i0 PRJNA857143 170329 252 2.178771 5.49050292 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 60.8 1.28e-8   NR MBA3247085.1 2283092 g169236 i0 44.4 0.75 63 35 75 0 3 191 225 287 MBA3247085.1 carbonic anhydrase [Pyrinomonadaceae bacterium] diamond 189 60.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29738913 29738913 PRJNA857143_S_NODE_107050_length_305_cov_2.508621_g105957_i0 PRJNA857143 107050 305 2.508621 7.65129405 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 43.9 0.0286   NR HEY3570156.1 2651171 g105957 i0 45.8 0.472131147540984 48 24 47.2 2 103 246 346 391 HEY3570156.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 144 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29738932 29738932 PRJNA857143_S_NODE_92810_length_321_cov_5.983871_g91717_i0 PRJNA857143 92810 321 5.983871 19.20822591 Acidobacteriota bacterium 1978231 Bacteria Bacteria 114 3.26e-30   NR MDQ7008654.1 1978231 g91717 i0 85.7 0.654205607476635 70 10 65.4 0 3 212 42 111 MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] diamond 210 114 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30244768 30244768 PRJNA857143_S_NODE_107872_length_304_cov_3.930736_g106779_i0 PRJNA857143 107872 304 3.930736 11.94943744 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 96.7 4.98e-22   NR HEY0404737.1 2283092 g106779 i0 60.9 2.78289473684211 69 27 68.1 0 301 95 174 242 HEY0404737.1 SDR family oxidoreductase [Pyrinomonadaceae bacterium] diamond 846 96.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30403057 30403057 PRJNA857143_S_NODE_143293_length_272_cov_1.175879_g142200_i0 PRJNA857143 143293 272 1.175879 3.19839088 Candidatus Solibacter sp. 2068625 Bacteria Bacteria 53.5 1.53e-6   NR HKA01297.1 2068625 g142200 i0 42.4 0.9375 85 42 93.8 2 258 4 39 116 HKA01297.1 glycoside hydrolase family 2 protein [Candidatus Solibacter sp.] diamond 255 53.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Solibacter Candidatus Solibacter sp.
30560356 30560356 PRJNA857143_S_NODE_83473_length_334_cov_1.195402_g82380_i0 PRJNA857143 83473 334 1.195402 3.99264268 Acidobacteriota bacterium 1978231 Bacteria Bacteria 66.6 3.26e-10   NR MDE3156438.1 1978231 g82380 i0 39.3 1.0059880239521 112 60 99.7 4 333 1 210 314 MDE3156438.1 thrombospondin type-1 domain-containing protein [Acidobacteriota bacterium] diamond 336 66.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30758387 30758387 PRJNA857143_S_NODE_74054_length_348_cov_1.134545_g72961_i0 PRJNA857143 74054 348 1.134545 3.9482166 Pseudomonadati 3379134 Bacteria Bacteria 106 2.35e-24   NR HME06967.1 2212468 g72961 i0 58.2 10.6206896551724 91 38 78.4 0 347 75 314 404 HME06967.1 acyl-CoA dehydrogenase family protein [Bryobacteraceae bacterium] diamond 3696 107 0.990654205607477 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30853099 30853099 PRJNA857143_S_NODE_112014_length_300_cov_1.718062_g110921_i0 PRJNA857143 112014 300 1.718062 5.154186 Bacteria 2 Bacteria Bacteria 131 3.39e-34   NR OFW25876.1 1797191 g110921 i0 67.7 1.92 96 31 96 0 296 9 134 229 OFW25876.1 MAG: hypothetical protein A3G21_14090 [Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21] diamond 576 131 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21
31066375 31066375 PRJNA857143_S_NODE_36055_length_438_cov_18.016438_g34963_i0 PRJNA857143 36055 438 18.016438 78.91199844 Acidobacteriota bacterium 1978231 Bacteria Bacteria 65.5 3.45e-9   NR MBX3294082.1 1978231 g34963 i0 58.8 0.349315068493151 51 21 34.9 0 347 195 573 623 MBX3294082.1 hypothetical protein [Acidobacteriota bacterium] diamond 153 65.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31445526 31445526 PRJNA857143_S_NODE_132116_length_281_cov_1.875000_g131023_i0 PRJNA857143 132116 281 1.875 5.26875 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 60.8 5.51e-9   NR MDX1382334.1 2651171 g131023 i0 36.1 1.78291814946619 83 43 88.6 3 251 3 95 167 MDX1382334.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 501 60.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31706729 31706729 PRJNA857143_S_NODE_12957_length_618_cov_1.495413_g11927_i0 PRJNA857143 12957 618 1.495413 9.24165234 Pseudomonadati 3379134 Bacteria Bacteria 325 2.1399999999999995e-105   NR MFQ5789980.1 1978231 g11927 i0 72.2 41.7961165048544 205 56 99.5 1 616 2 225 428 MFQ5789980.1 glycoside hydrolase family 15 protein [Acidobacteriota bacterium] diamond 25830 326 0.996932515337423 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31888249 31888249 PRJNA857143_S_NODE_132957_length_280_cov_3.014493_g131864_i0 PRJNA857143 132957 280 3.014493 8.4405804 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 73.9 2.87e-13   NR HET9839000.1 2976921 g131864 i0 73.9 0.492857142857143 46 12 49.3 0 3 140 229 274 HET9839000.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Candidatus Angelobacter sp.] diamond 138 73.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
31888259 31888259 PRJNA857143_S_NODE_72257_length_351_cov_1.402878_g71164_i0 PRJNA857143 72257 351 1.402878 4.92410178 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 44.7 0.0115   NR MBV9403754.1 2052142 g71164 i0 34.8 0.786324786324786 92 56 77.8 2 12 284 64 152 MBV9403754.1 SLATT domain-containing protein [Acidobacteriaceae bacterium] diamond 276 44.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
31983187 31983187 PRJNA857143_S_NODE_85758_length_331_cov_0.906977_g84665_i0 PRJNA857143 85758 331 0.906977 3.00209387 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 83.2 5.16e-16   NR MEO8679489.1 2910147 g84665 i0 39.2 0.924471299093656 102 54 91.5 3 331 29 8 102 MEO8679489.1 thrombospondin type-1 domain-containing protein [Vicinamibacterales bacterium] diamond 306 83.2 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32331702 32331702 PRJNA857143_S_NODE_19459_length_536_cov_2.784017_g18380_i0 PRJNA857143 19459 536 2.784017 14.92233112 Thermoanaerobaculales bacterium 2873827 Bacteria Bacteria 195 5.29e-60   NR MFV2073489.1 2873827 g18380 i0 57.9 0.957089552238806 171 72 95.7 0 22 534 1 171 MFV2073489.1 hypothetical protein [Thermoanaerobaculales bacterium] diamond 513 195 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales     Thermoanaerobaculales bacterium
32749926 32749926 PRJNA857143_S_NODE_143140_length_272_cov_1.391960_g142047_i0 PRJNA857143 143140 272 1.39196 3.7861312 Bacteria 2 Bacteria Bacteria 84 6.07e-18   NR PYQ34716.1 1978231 g142047 i0 58.6 9.28676470588235 58 24 64 0 3 176 118 175 PYQ34716.1 MAG: hypothetical protein DMF55_08860, partial [Acidobacteriota bacterium] diamond 2526 84 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32812850 32812850 PRJNA857143_S_NODE_158340_length_260_cov_1.893048_g157247_i0 PRJNA857143 158340 260 1.893048 4.9219248 Bacteria 2 Bacteria Bacteria 95.1 3.6e-21   NR HEY2931275.1 1978231 g157247 i0 57 6.91153846153846 86 37 99.2 0 2 259 225 310 HEY2931275.1 NADPH:quinone reductase [Acidobacteriota bacterium] diamond 1797 95.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;